SLC22A18

 

Full name: solute carrier family 22 member 18 Alias Symbol: BWR1A|TSSC5|ITM
Type: protein-coding gene Cytoband: 11p15.4
Entrez ID: 5002 HGNC ID: HGNC:10964 Ensembl Gene: ENSG00000110628 OMIM ID: 602631
Drug and gene relationship at DGIdb

 

Expression of SLC22A18:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLC22A18 5002 204981_at -0.5832 0.2928
GSE20347 SLC22A18 5002 204981_at -0.8799 0.0003
GSE23400 SLC22A18 5002 204981_at -0.1307 0.1076
GSE26886 SLC22A18 5002 204981_at 0.2027 0.4650
GSE29001 SLC22A18 5002 204981_at -0.5346 0.0057
GSE38129 SLC22A18 5002 204981_at -0.2818 0.2340
GSE45670 SLC22A18 5002 204981_at 0.0867 0.7780
GSE53622 SLC22A18 5002 115418 -0.3460 0.0162
GSE53624 SLC22A18 5002 115418 -0.3639 0.0003
GSE63941 SLC22A18 5002 204981_at -0.0490 0.9553
GSE77861 SLC22A18 5002 204981_at -0.2753 0.6012
GSE97050 SLC22A18 5002 A_23_P139260 0.3668 0.2499
SRP007169 SLC22A18 5002 RNAseq -1.3459 0.0028
SRP008496 SLC22A18 5002 RNAseq -1.8111 0.0000
SRP064894 SLC22A18 5002 RNAseq 0.2721 0.3450
SRP133303 SLC22A18 5002 RNAseq -0.2993 0.2428
SRP159526 SLC22A18 5002 RNAseq -0.1810 0.6804
SRP193095 SLC22A18 5002 RNAseq -0.7690 0.0037
SRP219564 SLC22A18 5002 RNAseq 0.6655 0.2802
TCGA SLC22A18 5002 RNAseq -0.0846 0.4429

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by SLC22A18 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SLC22A18:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLC22A18 5002 1 11 18
GSE20123 SLC22A18 5002 1 12 17
GSE43470 SLC22A18 5002 1 10 32
GSE46452 SLC22A18 5002 7 8 44
GSE47630 SLC22A18 5002 4 12 24
GSE54993 SLC22A18 5002 3 1 66
GSE54994 SLC22A18 5002 1 12 40
GSE60625 SLC22A18 5002 0 0 11
GSE74703 SLC22A18 5002 1 8 27
GSE74704 SLC22A18 5002 0 8 12
TCGA SLC22A18 5002 8 39 49

Total number of gains: 27; Total number of losses: 121; Total Number of normals: 340.  


 

Somatic mutations of SLC22A18:

 

Generating mutation plots.

 

Highly correlated genes for SLC22A18:

 

Showing top 20/457 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLC22A18C1orf2100.748854303
SLC22A18MARVELD20.702105303
SLC22A18FAM110C0.697562504
SLC22A18RDH120.695757303
SLC22A18B4GALNT30.681977303
SLC22A18DNASE1L10.679594403
SLC22A18TMEM45B0.678321303
SLC22A18DMKN0.678162404
SLC22A18DUOXA10.675548404
SLC22A18USP430.659491303
SLC22A18OTOR0.656446303
SLC22A18CERS30.651895403
SLC22A18GJB60.650245403
SLC22A18FAM83G0.648708504
SLC22A18KLK110.643252706
SLC22A18CDRT10.640066303
SLC22A18HSBP1L10.639365303
SLC22A18CES20.636085504
SLC22A18TGM30.634293504
SLC22A18SCEL0.633813504

For details and further investigation, click here