SLC35F5

 

Full name: solute carrier family 35 member F5 Alias Symbol: FLJ22004
Type: protein-coding gene Cytoband: 2q14.1
Entrez ID: 80255 HGNC ID: HGNC:23617 Ensembl Gene: ENSG00000115084 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of SLC35F5:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLC35F5 80255 225872_at -0.1632 0.8436
GSE20347 SLC35F5 80255 220123_at 0.4101 0.0179
GSE23400 SLC35F5 80255 220123_at 0.0874 0.0001
GSE26886 SLC35F5 80255 225872_at -1.2654 0.0000
GSE29001 SLC35F5 80255 220123_at 0.1597 0.7050
GSE38129 SLC35F5 80255 220123_at 0.7162 0.0003
GSE45670 SLC35F5 80255 225872_at -0.0163 0.9475
GSE53622 SLC35F5 80255 58951 -0.2036 0.0005
GSE53624 SLC35F5 80255 58951 -0.4557 0.0000
GSE63941 SLC35F5 80255 225872_at -1.0834 0.0095
GSE77861 SLC35F5 80255 225872_at -0.4069 0.2403
GSE97050 SLC35F5 80255 A_23_P361569 0.1148 0.6916
SRP007169 SLC35F5 80255 RNAseq -1.0917 0.0012
SRP008496 SLC35F5 80255 RNAseq -0.6995 0.0041
SRP064894 SLC35F5 80255 RNAseq -0.5597 0.0123
SRP133303 SLC35F5 80255 RNAseq -0.1135 0.4901
SRP159526 SLC35F5 80255 RNAseq -0.1649 0.5723
SRP193095 SLC35F5 80255 RNAseq -0.4996 0.0000
SRP219564 SLC35F5 80255 RNAseq -0.7105 0.0307
TCGA SLC35F5 80255 RNAseq -0.0831 0.1149

Upregulated datasets: 0; Downregulated datasets: 3.  


 

Survival by SLC35F5 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SLC35F5:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLC35F5 80255 7 2 21
GSE20123 SLC35F5 80255 7 2 21
GSE43470 SLC35F5 80255 3 1 39
GSE46452 SLC35F5 80255 1 4 54
GSE47630 SLC35F5 80255 6 0 34
GSE54993 SLC35F5 80255 0 6 64
GSE54994 SLC35F5 80255 11 0 42
GSE60625 SLC35F5 80255 0 3 8
GSE74703 SLC35F5 80255 3 1 32
GSE74704 SLC35F5 80255 3 2 15
TCGA SLC35F5 80255 31 6 59

Total number of gains: 72; Total number of losses: 27; Total Number of normals: 389.  


 

Somatic mutations of SLC35F5:

 

Generating mutation plots.

 

Highly correlated genes for SLC35F5:

 

Showing top 20/522 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLC35F5PIK3C30.773122303
SLC35F5SLC38A90.761877303
SLC35F5ALG140.745929404
SLC35F5SPIN40.739505303
SLC35F5ZCCHC100.737566505
SLC35F5MITD10.725778303
SLC35F5TMEM1170.724475303
SLC35F5EPG50.719137404
SLC35F5SPTLC30.718332404
SLC35F5PPARD0.713159303
SLC35F5TRERF10.712152303
SLC35F5IMPACT0.711937404
SLC35F5SNRNP2000.703806303
SLC35F5ZMAT20.701286303
SLC35F5AASDHPPT0.696259404
SLC35F5RAP2C0.688058403
SLC35F5IPMK0.685922504
SLC35F5RASA20.68419403
SLC35F5KCTD100.67928303
SLC35F5SAP1300.671293403

For details and further investigation, click here