SLC38A7

 

Full name: solute carrier family 38 member 7 Alias Symbol: FLJ10815
Type: protein-coding gene Cytoband: 16q21
Entrez ID: 55238 HGNC ID: HGNC:25582 Ensembl Gene: ENSG00000103042 OMIM ID: 614236
Drug and gene relationship at DGIdb

 

Expression of SLC38A7:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLC38A7 55238 56821_at 0.5409 0.0727
GSE20347 SLC38A7 55238 56821_at 0.5052 0.0003
GSE23400 SLC38A7 55238 56821_at 0.1204 0.0045
GSE26886 SLC38A7 55238 56821_at 0.1378 0.4167
GSE29001 SLC38A7 55238 56821_at 0.4209 0.1443
GSE38129 SLC38A7 55238 56821_at 0.5673 0.0000
GSE45670 SLC38A7 55238 56821_at 0.5359 0.0000
GSE53622 SLC38A7 55238 57125 0.1226 0.0286
GSE53624 SLC38A7 55238 57125 0.0080 0.9279
GSE63941 SLC38A7 55238 56821_at -0.2413 0.6195
GSE77861 SLC38A7 55238 56821_at 0.2446 0.1282
GSE97050 SLC38A7 55238 A_23_P65967 -0.1120 0.7189
SRP007169 SLC38A7 55238 RNAseq 1.0587 0.0115
SRP008496 SLC38A7 55238 RNAseq 0.9992 0.0001
SRP064894 SLC38A7 55238 RNAseq 1.1855 0.0000
SRP133303 SLC38A7 55238 RNAseq 0.9981 0.0000
SRP159526 SLC38A7 55238 RNAseq 0.8512 0.0009
SRP193095 SLC38A7 55238 RNAseq 0.7624 0.0000
SRP219564 SLC38A7 55238 RNAseq 0.7691 0.0160
TCGA SLC38A7 55238 RNAseq 0.2962 0.0000

Upregulated datasets: 2; Downregulated datasets: 0.  


 

Survival by SLC38A7 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SLC38A7:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLC38A7 55238 7 0 23
GSE20123 SLC38A7 55238 7 0 23
GSE43470 SLC38A7 55238 2 7 34
GSE46452 SLC38A7 55238 38 1 20
GSE47630 SLC38A7 55238 10 8 22
GSE54993 SLC38A7 55238 2 4 64
GSE54994 SLC38A7 55238 6 10 37
GSE60625 SLC38A7 55238 4 0 7
GSE74703 SLC38A7 55238 2 5 29
GSE74704 SLC38A7 55238 5 0 15
TCGA SLC38A7 55238 26 11 59

Total number of gains: 109; Total number of losses: 46; Total Number of normals: 333.  


 

Somatic mutations of SLC38A7:

 

Generating mutation plots.

 

Highly correlated genes for SLC38A7:

 

Showing top 20/847 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLC38A7SEC16A0.803991303
SLC38A7CTPS20.763644303
SLC38A7TRIT10.759887303
SLC38A7SPEG0.75192303
SLC38A7SFTPA20.745628303
SLC38A7B3GALT60.742075303
SLC38A7MOB3C0.741381303
SLC38A7PON20.73847303
SLC38A7SGSH0.737813404
SLC38A7TMEM63B0.737236606
SLC38A7KRTAP21-20.734656303
SLC38A7KRTAP12-20.734369404
SLC38A7KRTAP10-90.730467303
SLC38A7LSM14B0.728653303
SLC38A7DEDD20.72522303
SLC38A7PRDM150.72368303
SLC38A7YWHAG0.721443404
SLC38A7MRPL550.721294404
SLC38A7KCTD150.720122303
SLC38A7SLC26A50.714762303

For details and further investigation, click here