| Full name: spermatogenesis associated 13 | Alias Symbol: FLJ31208|ARHGEF29 | ||
| Type: protein-coding gene | Cytoband: 13q12.12 | ||
| Entrez ID: 221178 | HGNC ID: HGNC:23222 | Ensembl Gene: ENSG00000182957 | OMIM ID: 613324 |
| Drug and gene relationship at DGIdb | |||
Expression of SPATA13:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SPATA13 | 221178 | 225564_at | 0.3288 | 0.6826 | |
| GSE26886 | SPATA13 | 221178 | 225564_at | 1.2403 | 0.0063 | |
| GSE45670 | SPATA13 | 221178 | 225564_at | -0.5594 | 0.0514 | |
| GSE53622 | SPATA13 | 221178 | 30029 | 0.3573 | 0.0011 | |
| GSE53624 | SPATA13 | 221178 | 30029 | 0.3396 | 0.0005 | |
| GSE63941 | SPATA13 | 221178 | 225564_at | -3.0621 | 0.0017 | |
| GSE77861 | SPATA13 | 221178 | 1562770_at | -0.0578 | 0.5589 | |
| GSE97050 | SPATA13 | 221178 | A_23_P390116 | 0.2832 | 0.3399 | |
| SRP007169 | SPATA13 | 221178 | RNAseq | 2.7717 | 0.0000 | |
| SRP008496 | SPATA13 | 221178 | RNAseq | 2.8400 | 0.0000 | |
| SRP064894 | SPATA13 | 221178 | RNAseq | 0.2113 | 0.5245 | |
| SRP133303 | SPATA13 | 221178 | RNAseq | 0.9282 | 0.0000 | |
| SRP159526 | SPATA13 | 221178 | RNAseq | 0.2162 | 0.5791 | |
| SRP193095 | SPATA13 | 221178 | RNAseq | 0.3990 | 0.2148 | |
| SRP219564 | SPATA13 | 221178 | RNAseq | 0.6218 | 0.0493 | |
| TCGA | SPATA13 | 221178 | RNAseq | -0.6447 | 0.0000 |
Upregulated datasets: 3; Downregulated datasets: 1.
Survival by SPATA13 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SPATA13:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SPATA13 | 221178 | 1 | 13 | 16 | |
| GSE20123 | SPATA13 | 221178 | 1 | 12 | 17 | |
| GSE43470 | SPATA13 | 221178 | 2 | 13 | 28 | |
| GSE46452 | SPATA13 | 221178 | 0 | 33 | 26 | |
| GSE47630 | SPATA13 | 221178 | 3 | 26 | 11 | |
| GSE54993 | SPATA13 | 221178 | 11 | 2 | 57 | |
| GSE54994 | SPATA13 | 221178 | 1 | 13 | 39 | |
| GSE60625 | SPATA13 | 221178 | 0 | 3 | 8 | |
| GSE74703 | SPATA13 | 221178 | 2 | 10 | 24 | |
| GSE74704 | SPATA13 | 221178 | 0 | 10 | 10 | |
| TCGA | SPATA13 | 221178 | 7 | 44 | 45 |
Total number of gains: 28; Total number of losses: 179; Total Number of normals: 281.
Somatic mutations of SPATA13:
Generating mutation plots.
Highly correlated genes for SPATA13:
Showing top 20/307 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SPATA13 | WIPF1 | 0.70871 | 6 | 0 | 6 |
| SPATA13 | PLXNC1 | 0.700993 | 6 | 0 | 6 |
| SPATA13 | CYTH4 | 0.690747 | 4 | 0 | 4 |
| SPATA13 | TNFSF13 | 0.681676 | 3 | 0 | 3 |
| SPATA13 | CD300C | 0.669614 | 4 | 0 | 3 |
| SPATA13 | MAD2L1BP | 0.667676 | 3 | 0 | 3 |
| SPATA13 | TMEM150B | 0.664138 | 3 | 0 | 3 |
| SPATA13 | TMEM176B | 0.663176 | 7 | 0 | 6 |
| SPATA13 | RHOQ | 0.653624 | 3 | 0 | 3 |
| SPATA13 | SMARCA5 | 0.65123 | 3 | 0 | 3 |
| SPATA13 | MAGEH1 | 0.65112 | 6 | 0 | 5 |
| SPATA13 | C11orf96 | 0.641793 | 3 | 0 | 3 |
| SPATA13 | RILPL2 | 0.641291 | 5 | 0 | 4 |
| SPATA13 | PIK3AP1 | 0.640506 | 6 | 0 | 5 |
| SPATA13 | CD81 | 0.639506 | 5 | 0 | 5 |
| SPATA13 | SLC41A2 | 0.638059 | 4 | 0 | 3 |
| SPATA13 | VEZF1 | 0.636178 | 3 | 0 | 3 |
| SPATA13 | DPYSL2 | 0.635523 | 5 | 0 | 4 |
| SPATA13 | DACT1 | 0.6318 | 7 | 0 | 7 |
| SPATA13 | PMP22 | 0.631656 | 6 | 0 | 5 |
For details and further investigation, click here
