| Full name: scavenger receptor cysteine rich family member with 5 domains | Alias Symbol: FLJ35258|S5D-SRCRB | ||
| Type: protein-coding gene | Cytoband: 19q13.42 | ||
| Entrez ID: 284297 | HGNC ID: HGNC:26641 | Ensembl Gene: ENSG00000179954 | OMIM ID: 618194 |
| Drug and gene relationship at DGIdb | |||
Expression of SSC5D:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SSC5D | 284297 | 230228_at | -0.3914 | 0.3618 | |
| GSE26886 | SSC5D | 284297 | 230228_at | 0.4786 | 0.0092 | |
| GSE45670 | SSC5D | 284297 | 230228_at | -0.2580 | 0.0095 | |
| GSE53622 | SSC5D | 284297 | 9044 | -0.4606 | 0.0011 | |
| GSE53624 | SSC5D | 284297 | 9044 | -0.2578 | 0.0093 | |
| GSE63941 | SSC5D | 284297 | 230228_at | -0.3981 | 0.0224 | |
| GSE77861 | SSC5D | 284297 | 230228_at | -0.0734 | 0.6275 | |
| GSE97050 | SSC5D | A_21_P0000127 | -0.0970 | 0.8428 | ||
| SRP007169 | SSC5D | 284297 | RNAseq | 4.0314 | 0.0017 | |
| SRP064894 | SSC5D | 284297 | RNAseq | 0.7396 | 0.1444 | |
| SRP133303 | SSC5D | 284297 | RNAseq | -0.1169 | 0.7729 | |
| SRP159526 | SSC5D | 284297 | RNAseq | -0.4483 | 0.3079 | |
| SRP219564 | SSC5D | 284297 | RNAseq | -0.0564 | 0.9543 | |
| TCGA | SSC5D | 284297 | RNAseq | -0.5780 | 0.0006 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by SSC5D expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SSC5D:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SSC5D | 284297 | 3 | 4 | 23 | |
| GSE20123 | SSC5D | 284297 | 3 | 3 | 24 | |
| GSE43470 | SSC5D | 284297 | 3 | 10 | 30 | |
| GSE46452 | SSC5D | 284297 | 45 | 1 | 13 | |
| GSE47630 | SSC5D | 284297 | 8 | 6 | 26 | |
| GSE54993 | SSC5D | 284297 | 17 | 4 | 49 | |
| GSE54994 | SSC5D | 284297 | 4 | 13 | 36 | |
| GSE60625 | SSC5D | 284297 | 9 | 0 | 2 | |
| GSE74703 | SSC5D | 284297 | 3 | 6 | 27 | |
| GSE74704 | SSC5D | 284297 | 3 | 1 | 16 | |
| TCGA | SSC5D | 284297 | 19 | 14 | 63 |
Total number of gains: 117; Total number of losses: 62; Total Number of normals: 309.
Somatic mutations of SSC5D:
Generating mutation plots.
Highly correlated genes for SSC5D:
Showing top 20/651 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SSC5D | MAST2 | 0.806573 | 3 | 0 | 3 |
| SSC5D | PIP5K1C | 0.79116 | 3 | 0 | 3 |
| SSC5D | PTP4A3 | 0.756652 | 4 | 0 | 3 |
| SSC5D | ZBTB10 | 0.756084 | 3 | 0 | 3 |
| SSC5D | SYNC | 0.75144 | 3 | 0 | 3 |
| SSC5D | GUCA1A | 0.737444 | 3 | 0 | 3 |
| SSC5D | DDIT3 | 0.737339 | 3 | 0 | 3 |
| SSC5D | SLC26A10 | 0.735116 | 4 | 0 | 4 |
| SSC5D | ENG | 0.73408 | 3 | 0 | 3 |
| SSC5D | CORO6 | 0.733523 | 3 | 0 | 3 |
| SSC5D | PRKACB | 0.730792 | 3 | 0 | 3 |
| SSC5D | NCDN | 0.7282 | 3 | 0 | 3 |
| SSC5D | DCHS1 | 0.726666 | 4 | 0 | 4 |
| SSC5D | KLF7 | 0.726254 | 3 | 0 | 3 |
| SSC5D | C20orf194 | 0.725802 | 3 | 0 | 3 |
| SSC5D | TRMT61A | 0.722423 | 3 | 0 | 3 |
| SSC5D | DPP4 | 0.722231 | 3 | 0 | 3 |
| SSC5D | POU6F1 | 0.720214 | 3 | 0 | 3 |
| SSC5D | LINC00968 | 0.718688 | 3 | 0 | 3 |
| SSC5D | HSPG2 | 0.716967 | 3 | 0 | 3 |
For details and further investigation, click here
