SUPT20H

 

Full name: SPT20 homolog, SAGA complex component Alias Symbol: SPT20|bA421P11.4|P38IP
Type: protein-coding gene Cytoband: 13q13.3
Entrez ID: 55578 HGNC ID: HGNC:20596 Ensembl Gene: ENSG00000102710 OMIM ID: 613417
Screen Evidence:

 

Expression of SUPT20H:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SUPT20H 55578 226330_s_at 0.0245 0.9714
GSE20347 SUPT20H 55578 220408_x_at 0.0755 0.5965
GSE23400 SUPT20H 55578 220408_x_at 0.1363 0.0194
GSE26886 SUPT20H 55578 226330_s_at 0.0080 0.9848
GSE29001 SUPT20H 55578 220408_x_at 0.1977 0.4920
GSE38129 SUPT20H 55578 220408_x_at -0.0747 0.4936
GSE45670 SUPT20H 55578 226330_s_at 0.0281 0.8765
GSE53622 SUPT20H 55578 20814 0.1327 0.0808
GSE53624 SUPT20H 55578 20814 0.2376 0.0002
GSE63941 SUPT20H 55578 221774_x_at 0.5133 0.2278
GSE77861 SUPT20H 55578 226330_s_at -0.0095 0.9765
SRP007169 SUPT20H 55578 RNAseq -0.3401 0.3378
SRP008496 SUPT20H 55578 RNAseq -0.2548 0.2900
SRP064894 SUPT20H 55578 RNAseq 0.2492 0.1354
SRP133303 SUPT20H 55578 RNAseq 0.0174 0.9258
SRP159526 SUPT20H 55578 RNAseq -0.3194 0.1017
SRP193095 SUPT20H 55578 RNAseq -0.2691 0.0005
SRP219564 SUPT20H 55578 RNAseq -0.4132 0.0467

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by SUPT20H expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of SUPT20H:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SUPT20H 55578 0 16 14
GSE20123 SUPT20H 55578 0 15 15
GSE43470 SUPT20H 55578 2 14 27
GSE46452 SUPT20H 55578 0 33 26
GSE47630 SUPT20H 55578 2 27 11
GSE54993 SUPT20H 55578 12 2 56
GSE54994 SUPT20H 55578 1 17 35
GSE60625 SUPT20H 55578 0 3 8
GSE74703 SUPT20H 55578 2 11 23
GSE74704 SUPT20H 55578 0 12 8
TCGA SUPT20H 55578 7 40 49

Total number of gains: 26; Total number of losses: 190; Total Number of normals: 272.  

 

Somatic mutations of SUPT20H:

 

Generating mutation plots.

 

Highly correlated genes for SUPT20H:

 

Showing top 20/73 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SUPT20HBPTF0.724315303
SUPT20HNHLRC30.680203404
SUPT20HUBXN40.628547504
SUPT20HZC3H130.612248907
SUPT20HSYNE20.611749403
SUPT20HTUBGCP30.603589706
SUPT20HMED40.603236706
SUPT20HTRMT110.598151403
SUPT20HEXOSC80.59480611011
SUPT20HPIBF10.591694908
SUPT20HSCAF80.58801504
SUPT20HUPF3A0.586601705
SUPT20HZNF450.586516404
SUPT20HZNF5070.582033303
SUPT20HCHD10.580804403
SUPT20HDHX340.578281303
SUPT20HGOSR10.571418403
SUPT20HRNF60.569456604
SUPT20HCKAP20.567334603
SUPT20HMRPS310.5673031008

For details and further investigation, click here