| Full name: synaptogyrin 1 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 22q13.1 | ||
| Entrez ID: 9145 | HGNC ID: HGNC:11498 | Ensembl Gene: ENSG00000100321 | OMIM ID: 603925 |
| Drug and gene relationship at DGIdb | |||
Expression of SYNGR1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SYNGR1 | 9145 | 210613_s_at | -1.1649 | 0.0357 | |
| GSE20347 | SYNGR1 | 9145 | 210613_s_at | -1.4346 | 0.0000 | |
| GSE23400 | SYNGR1 | 9145 | 204287_at | -0.2623 | 0.0000 | |
| GSE26886 | SYNGR1 | 9145 | 210613_s_at | -1.4502 | 0.0000 | |
| GSE29001 | SYNGR1 | 9145 | 204287_at | -0.4838 | 0.0942 | |
| GSE38129 | SYNGR1 | 9145 | 210613_s_at | -1.2963 | 0.0000 | |
| GSE45670 | SYNGR1 | 9145 | 210613_s_at | -0.6305 | 0.0172 | |
| GSE53622 | SYNGR1 | 9145 | 15316 | -1.4069 | 0.0000 | |
| GSE53624 | SYNGR1 | 9145 | 15316 | -1.4992 | 0.0000 | |
| GSE63941 | SYNGR1 | 9145 | 210613_s_at | -1.6335 | 0.0098 | |
| GSE77861 | SYNGR1 | 9145 | 210613_s_at | -0.7765 | 0.0339 | |
| GSE97050 | SYNGR1 | 9145 | A_33_P3284404 | -0.5643 | 0.2841 | |
| SRP007169 | SYNGR1 | 9145 | RNAseq | -2.8557 | 0.0000 | |
| SRP008496 | SYNGR1 | 9145 | RNAseq | -2.7555 | 0.0000 | |
| SRP064894 | SYNGR1 | 9145 | RNAseq | -0.7726 | 0.0202 | |
| SRP133303 | SYNGR1 | 9145 | RNAseq | -1.9773 | 0.0000 | |
| SRP159526 | SYNGR1 | 9145 | RNAseq | -1.0547 | 0.0020 | |
| SRP193095 | SYNGR1 | 9145 | RNAseq | -1.4604 | 0.0000 | |
| SRP219564 | SYNGR1 | 9145 | RNAseq | -1.3213 | 0.0000 | |
| TCGA | SYNGR1 | 9145 | RNAseq | -0.3758 | 0.0115 |
Upregulated datasets: 0; Downregulated datasets: 13.
Survival by SYNGR1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SYNGR1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SYNGR1 | 9145 | 6 | 5 | 19 | |
| GSE20123 | SYNGR1 | 9145 | 6 | 4 | 20 | |
| GSE43470 | SYNGR1 | 9145 | 5 | 6 | 32 | |
| GSE46452 | SYNGR1 | 9145 | 32 | 2 | 25 | |
| GSE47630 | SYNGR1 | 9145 | 9 | 4 | 27 | |
| GSE54993 | SYNGR1 | 9145 | 4 | 5 | 61 | |
| GSE54994 | SYNGR1 | 9145 | 10 | 7 | 36 | |
| GSE60625 | SYNGR1 | 9145 | 5 | 0 | 6 | |
| GSE74703 | SYNGR1 | 9145 | 5 | 4 | 27 | |
| GSE74704 | SYNGR1 | 9145 | 3 | 2 | 15 | |
| TCGA | SYNGR1 | 9145 | 27 | 15 | 54 |
Total number of gains: 112; Total number of losses: 54; Total Number of normals: 322.
Somatic mutations of SYNGR1:
Generating mutation plots.
Highly correlated genes for SYNGR1:
Showing top 20/1223 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SYNGR1 | VSIG10L | 0.819516 | 6 | 0 | 6 |
| SYNGR1 | ANKRD35 | 0.792565 | 8 | 0 | 8 |
| SYNGR1 | CAPN5 | 0.789759 | 10 | 0 | 10 |
| SYNGR1 | SFTA2 | 0.786135 | 4 | 0 | 4 |
| SYNGR1 | SPINK7 | 0.776775 | 6 | 0 | 6 |
| SYNGR1 | MGLL | 0.762655 | 11 | 0 | 11 |
| SYNGR1 | SMDT1 | 0.762513 | 4 | 0 | 4 |
| SYNGR1 | SPINK5 | 0.760678 | 9 | 0 | 9 |
| SYNGR1 | TMPRSS11B | 0.758018 | 6 | 0 | 6 |
| SYNGR1 | NUCB2 | 0.757267 | 11 | 0 | 11 |
| SYNGR1 | CXCR2 | 0.75182 | 10 | 0 | 10 |
| SYNGR1 | FAM214A | 0.748275 | 6 | 0 | 6 |
| SYNGR1 | MYZAP | 0.745756 | 3 | 0 | 3 |
| SYNGR1 | BNIPL | 0.744515 | 6 | 0 | 6 |
| SYNGR1 | PMM1 | 0.742083 | 10 | 0 | 10 |
| SYNGR1 | ATP13A4 | 0.742044 | 6 | 0 | 6 |
| SYNGR1 | GYS2 | 0.741398 | 9 | 0 | 9 |
| SYNGR1 | RRAGD | 0.741242 | 10 | 0 | 10 |
| SYNGR1 | GDPD3 | 0.736998 | 10 | 0 | 9 |
| SYNGR1 | CCDC12 | 0.734633 | 5 | 0 | 5 |
For details and further investigation, click here
