| Full name: synaptojanin 2 binding protein | Alias Symbol: Arip2 | ||
| Type: protein-coding gene | Cytoband: 14q24.2 | ||
| Entrez ID: 55333 | HGNC ID: HGNC:18955 | Ensembl Gene: ENSG00000213463 | OMIM ID: 609411 |
| Drug and gene relationship at DGIdb | |||
Expression of SYNJ2BP:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE53622 | SYNJ2BP | 55333 | 128713 | 0.0226 | 0.8210 | |
| GSE53624 | SYNJ2BP | 55333 | 128713 | 0.1142 | 0.0684 | |
| GSE97050 | SYNJ2BP | 55333 | A_23_P65357 | -0.3095 | 0.3077 | |
| SRP007169 | SYNJ2BP | 55333 | RNAseq | 0.6990 | 0.0487 | |
| SRP008496 | SYNJ2BP | 55333 | RNAseq | 0.5452 | 0.0018 | |
| SRP064894 | SYNJ2BP | 55333 | RNAseq | 0.2843 | 0.0843 | |
| SRP133303 | SYNJ2BP | 55333 | RNAseq | 0.0585 | 0.7683 | |
| SRP159526 | SYNJ2BP | 55333 | RNAseq | 0.1695 | 0.4772 | |
| SRP193095 | SYNJ2BP | 55333 | RNAseq | -0.1400 | 0.2745 | |
| SRP219564 | SYNJ2BP | 55333 | RNAseq | 0.0020 | 0.9963 | |
| TCGA | SYNJ2BP | 55333 | RNAseq | -0.4479 | 0.0000 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SYNJ2BP expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SYNJ2BP:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SYNJ2BP | 55333 | 8 | 3 | 19 | |
| GSE20123 | SYNJ2BP | 55333 | 8 | 3 | 19 | |
| GSE43470 | SYNJ2BP | 55333 | 8 | 3 | 32 | |
| GSE46452 | SYNJ2BP | 55333 | 16 | 3 | 40 | |
| GSE47630 | SYNJ2BP | 55333 | 11 | 9 | 20 | |
| GSE54993 | SYNJ2BP | 55333 | 3 | 9 | 58 | |
| GSE54994 | SYNJ2BP | 55333 | 18 | 5 | 30 | |
| GSE60625 | SYNJ2BP | 55333 | 0 | 2 | 9 | |
| GSE74703 | SYNJ2BP | 55333 | 7 | 3 | 26 | |
| GSE74704 | SYNJ2BP | 55333 | 3 | 3 | 14 | |
| TCGA | SYNJ2BP | 55333 | 32 | 16 | 48 |
Total number of gains: 114; Total number of losses: 59; Total Number of normals: 315.
Somatic mutations of SYNJ2BP:
Generating mutation plots.
Highly correlated genes for SYNJ2BP:
Showing top 20/33 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SYNJ2BP | SGCB | 0.694834 | 3 | 0 | 3 |
| SYNJ2BP | DUSP19 | 0.691922 | 4 | 0 | 4 |
| SYNJ2BP | CREB3 | 0.689573 | 3 | 0 | 3 |
| SYNJ2BP | RNF14 | 0.687146 | 3 | 0 | 3 |
| SYNJ2BP | RGMB | 0.676585 | 3 | 0 | 3 |
| SYNJ2BP | PHYH | 0.674963 | 3 | 0 | 3 |
| SYNJ2BP | LAMA4 | 0.670655 | 3 | 0 | 3 |
| SYNJ2BP | SOCS5 | 0.662909 | 3 | 0 | 3 |
| SYNJ2BP | LIN52 | 0.662507 | 3 | 0 | 3 |
| SYNJ2BP | SEC23A | 0.648396 | 3 | 0 | 3 |
| SYNJ2BP | SPATA7 | 0.646931 | 3 | 0 | 3 |
| SYNJ2BP | EXTL2 | 0.636619 | 3 | 0 | 3 |
| SYNJ2BP | CAMK1 | 0.633497 | 3 | 0 | 3 |
| SYNJ2BP | FAM13A | 0.633253 | 3 | 0 | 3 |
| SYNJ2BP | FOXF2 | 0.632282 | 3 | 0 | 3 |
| SYNJ2BP | CHURC1 | 0.630308 | 3 | 0 | 3 |
| SYNJ2BP | PDGFD | 0.6288 | 3 | 0 | 3 |
| SYNJ2BP | SOBP | 0.627266 | 4 | 0 | 3 |
| SYNJ2BP | SLC12A4 | 0.625454 | 3 | 0 | 3 |
| SYNJ2BP | KCTD7 | 0.619326 | 4 | 0 | 3 |
For details and further investigation, click here
