| Full name: TATA-box binding protein associated factor 4b | Alias Symbol: TAFII105 | ||
| Type: protein-coding gene | Cytoband: 18q11.1 | ||
| Entrez ID: 6875 | HGNC ID: HGNC:11538 | Ensembl Gene: ENSG00000141384 | OMIM ID: 601689 |
Screen Evidence:
| |||
Expression of TAF4B:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TAF4B | 6875 | 235020_at | 0.6931 | 0.0748 | |
| GSE20347 | TAF4B | 6875 | 216226_at | 0.2426 | 0.0057 | |
| GSE23400 | TAF4B | 6875 | 216226_at | -0.0012 | 0.9793 | |
| GSE26886 | TAF4B | 6875 | 235020_at | 0.7888 | 0.0128 | |
| GSE29001 | TAF4B | 6875 | 216226_at | -0.0675 | 0.5887 | |
| GSE38129 | TAF4B | 6875 | 216226_at | 0.1317 | 0.1813 | |
| GSE45670 | TAF4B | 6875 | 235020_at | 0.0794 | 0.6875 | |
| GSE53622 | TAF4B | 6875 | 83522 | 0.3885 | 0.0004 | |
| GSE53624 | TAF4B | 6875 | 80657 | 0.3506 | 0.0012 | |
| GSE63941 | TAF4B | 6875 | 235020_at | 1.7564 | 0.0174 | |
| GSE77861 | TAF4B | 6875 | 235020_at | 0.7347 | 0.2480 | |
| GSE97050 | TAF4B | 6875 | A_33_P3336282 | 0.5784 | 0.1399 | |
| SRP007169 | TAF4B | 6875 | RNAseq | 0.8752 | 0.0265 | |
| SRP008496 | TAF4B | 6875 | RNAseq | 0.5262 | 0.0929 | |
| SRP064894 | TAF4B | 6875 | RNAseq | 0.1160 | 0.6643 | |
| SRP133303 | TAF4B | 6875 | RNAseq | 0.3567 | 0.2396 | |
| SRP159526 | TAF4B | 6875 | RNAseq | 0.2998 | 0.5136 | |
| SRP193095 | TAF4B | 6875 | RNAseq | 0.1970 | 0.1139 | |
| SRP219564 | TAF4B | 6875 | RNAseq | 0.1452 | 0.7484 | |
| TCGA | TAF4B | 6875 | RNAseq | 0.3141 | 0.0003 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by TAF4B expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TAF4B:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TAF4B | 6875 | 1 | 6 | 23 | |
| GSE20123 | TAF4B | 6875 | 1 | 6 | 23 | |
| GSE43470 | TAF4B | 6875 | 1 | 2 | 40 | |
| GSE46452 | TAF4B | 6875 | 1 | 25 | 33 | |
| GSE47630 | TAF4B | 6875 | 6 | 19 | 15 | |
| GSE54993 | TAF4B | 6875 | 7 | 1 | 62 | |
| GSE54994 | TAF4B | 6875 | 3 | 14 | 36 | |
| GSE60625 | TAF4B | 6875 | 0 | 4 | 7 | |
| GSE74703 | TAF4B | 6875 | 1 | 2 | 33 | |
| GSE74704 | TAF4B | 6875 | 1 | 5 | 14 | |
| TCGA | TAF4B | 6875 | 15 | 33 | 48 |
Total number of gains: 37; Total number of losses: 117; Total Number of normals: 334.
Somatic mutations of TAF4B:
Generating mutation plots.
Highly correlated genes for TAF4B:
Showing top 20/710 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TAF4B | MRPL14 | 0.778426 | 3 | 0 | 3 |
| TAF4B | RICTOR | 0.773402 | 4 | 0 | 4 |
| TAF4B | CLDN12 | 0.757918 | 3 | 0 | 3 |
| TAF4B | CLPTM1L | 0.752426 | 4 | 0 | 4 |
| TAF4B | GSDMB | 0.750463 | 3 | 0 | 3 |
| TAF4B | HSPBP1 | 0.749864 | 3 | 0 | 3 |
| TAF4B | ZNF518B | 0.738038 | 4 | 0 | 3 |
| TAF4B | SYCP2 | 0.736524 | 3 | 0 | 3 |
| TAF4B | CPNE8 | 0.73441 | 3 | 0 | 3 |
| TAF4B | SAMD1 | 0.733716 | 3 | 0 | 3 |
| TAF4B | LRP8 | 0.729913 | 3 | 0 | 3 |
| TAF4B | RAC3 | 0.72862 | 3 | 0 | 3 |
| TAF4B | ZNF713 | 0.726063 | 4 | 0 | 4 |
| TAF4B | NAP1L1 | 0.725246 | 4 | 0 | 3 |
| TAF4B | MRPS6 | 0.718797 | 3 | 0 | 3 |
| TAF4B | NCSTN | 0.717741 | 3 | 0 | 3 |
| TAF4B | NOL9 | 0.715569 | 4 | 0 | 4 |
| TAF4B | GPR160 | 0.715274 | 3 | 0 | 3 |
| TAF4B | ASXL1 | 0.710525 | 5 | 0 | 5 |
| TAF4B | KCNE3 | 0.704599 | 3 | 0 | 3 |
For details and further investigation, click here
