TBC1D10A

 

Full name: TBC1 domain family member 10A Alias Symbol: EPI64|AC004997.C22.2
Type: protein-coding gene Cytoband: 22q12.2
Entrez ID: 83874 HGNC ID: HGNC:23609 Ensembl Gene: ENSG00000099992 OMIM ID: 610020
Drug and gene relationship at DGIdb

 

Expression of TBC1D10A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TBC1D10A 83874 226133_s_at -0.4407 0.1880
GSE26886 TBC1D10A 83874 226133_s_at -0.0779 0.7517
GSE45670 TBC1D10A 83874 226133_s_at -0.1306 0.2597
GSE53622 TBC1D10A 83874 36235 -0.6671 0.0000
GSE53624 TBC1D10A 83874 36235 -0.8073 0.0000
GSE63941 TBC1D10A 83874 226133_s_at 0.1984 0.5899
GSE77861 TBC1D10A 83874 226133_s_at 0.0205 0.9050
GSE97050 TBC1D10A 83874 A_23_P166421 -0.0751 0.8346
SRP007169 TBC1D10A 83874 RNAseq -1.9707 0.0000
SRP008496 TBC1D10A 83874 RNAseq -1.8241 0.0000
SRP064894 TBC1D10A 83874 RNAseq -0.5112 0.0072
SRP133303 TBC1D10A 83874 RNAseq -0.6880 0.0002
SRP159526 TBC1D10A 83874 RNAseq -1.1938 0.0000
SRP193095 TBC1D10A 83874 RNAseq -0.4766 0.0007
SRP219564 TBC1D10A 83874 RNAseq -0.2926 0.5448
TCGA TBC1D10A 83874 RNAseq 0.0547 0.4222

Upregulated datasets: 0; Downregulated datasets: 3.  


 

Survival by TBC1D10A expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of TBC1D10A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TBC1D10A 83874 5 5 20
GSE20123 TBC1D10A 83874 5 4 21
GSE43470 TBC1D10A 83874 4 6 33
GSE46452 TBC1D10A 83874 31 1 27
GSE47630 TBC1D10A 83874 8 5 27
GSE54993 TBC1D10A 83874 3 6 61
GSE54994 TBC1D10A 83874 11 8 34
GSE60625 TBC1D10A 83874 5 0 6
GSE74703 TBC1D10A 83874 4 5 27
GSE74704 TBC1D10A 83874 2 1 17
TCGA TBC1D10A 83874 27 15 54

Total number of gains: 105; Total number of losses: 56; Total Number of normals: 327.  


 

Somatic mutations of TBC1D10A:

 

Generating mutation plots.

 

Highly correlated genes for TBC1D10A:

 

Showing top 20/306 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TBC1D10ASMAGP0.764303
TBC1D10AC15orf480.733417303
TBC1D10AEPHA10.729915303
TBC1D10AESPL10.724595303
TBC1D10AATP6V1F0.719164303
TBC1D10ACYP2J20.717473303
TBC1D10AMAPK130.716731303
TBC1D10AETHE10.707739303
TBC1D10ACYP11A10.701913404
TBC1D10AASCC20.694199303
TBC1D10AC6orf1320.689358303
TBC1D10ALMO70.686847303
TBC1D10AKRT320.686434505
TBC1D10AVSIG10L0.685633404
TBC1D10AUPK3B0.684828303
TBC1D10ALGALS30.684552303
TBC1D10ACXCR20.684306303
TBC1D10ANEBL0.683817303
TBC1D10ABLVRB0.683233404
TBC1D10APELI10.680866303

For details and further investigation, click here