| Full name: TINCR ubiquitin domain containing | Alias Symbol: FLJ90734|NCRNA00036|LINC00036|onco-lncRNA-16 | ||
| Type: protein-coding gene | Cytoband: 19p13.3 | ||
| Entrez ID: 257000 | HGNC ID: HGNC:14607 | Ensembl Gene: ENSG00000223573 | OMIM ID: 615241 |
Expression of TINCR:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TINCR | 257000 | 229385_s_at | 0.2929 | 0.7834 | |
| GSE26886 | TINCR | 257000 | 229385_s_at | -1.2230 | 0.0041 | |
| GSE45670 | TINCR | 257000 | 229385_s_at | 0.2587 | 0.3164 | |
| GSE53622 | TINCR | 257000 | 80665 | -0.4266 | 0.0965 | |
| GSE53624 | TINCR | 257000 | 12035 | -0.7978 | 0.0000 | |
| GSE63941 | TINCR | 257000 | 229385_s_at | 1.8973 | 0.0264 | |
| GSE77861 | TINCR | 257000 | 229385_s_at | -0.4742 | 0.2239 | |
| SRP007169 | TINCR | 257000 | RNAseq | -1.3628 | 0.0038 | |
| SRP008496 | TINCR | 257000 | RNAseq | -1.5775 | 0.0000 | |
| SRP064894 | TINCR | 257000 | RNAseq | -0.7049 | 0.0361 | |
| SRP133303 | TINCR | 257000 | RNAseq | -0.8099 | 0.0093 | |
| SRP159526 | TINCR | 257000 | RNAseq | -1.5201 | 0.0195 | |
| SRP219564 | TINCR | 257000 | RNAseq | -1.9564 | 0.0315 |
Upregulated datasets: 1; Downregulated datasets: 5.
Survival by TINCR expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of TINCR:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TINCR | 257000 | 5 | 3 | 22 | |
| GSE20123 | TINCR | 257000 | 4 | 2 | 24 | |
| GSE43470 | TINCR | 257000 | 2 | 6 | 35 | |
| GSE46452 | TINCR | 257000 | 47 | 1 | 11 | |
| GSE47630 | TINCR | 257000 | 5 | 7 | 28 | |
| GSE54993 | TINCR | 257000 | 16 | 3 | 51 | |
| GSE54994 | TINCR | 257000 | 6 | 16 | 31 | |
| GSE60625 | TINCR | 257000 | 9 | 0 | 2 | |
| GSE74703 | TINCR | 257000 | 2 | 4 | 30 | |
| GSE74704 | TINCR | 257000 | 1 | 2 | 17 | |
| TCGA | TINCR | 257000 | 12 | 18 | 66 |
Total number of gains: 109; Total number of losses: 62; Total Number of normals: 317.
Somatic mutations of TINCR:
Generating mutation plots.
Highly correlated genes for TINCR:
Showing top 20/299 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TINCR | ABHD16A | 0.701776 | 3 | 0 | 3 |
| TINCR | S100A16 | 0.686365 | 4 | 0 | 4 |
| TINCR | VILL | 0.667996 | 3 | 0 | 3 |
| TINCR | SHKBP1 | 0.667014 | 3 | 0 | 3 |
| TINCR | GSDMC | 0.666837 | 4 | 0 | 3 |
| TINCR | MREG | 0.664302 | 4 | 0 | 4 |
| TINCR | NT5DC2 | 0.6628 | 3 | 0 | 3 |
| TINCR | LYPD3 | 0.661969 | 5 | 0 | 5 |
| TINCR | GRHL3 | 0.661493 | 5 | 0 | 5 |
| TINCR | EIF4EBP2 | 0.658045 | 3 | 0 | 3 |
| TINCR | BTBD11 | 0.657698 | 4 | 0 | 4 |
| TINCR | GJB5 | 0.654083 | 5 | 0 | 5 |
| TINCR | NPRL2 | 0.65366 | 3 | 0 | 3 |
| TINCR | TMEM40 | 0.649691 | 5 | 0 | 5 |
| TINCR | ADRB1 | 0.646803 | 3 | 0 | 3 |
| TINCR | S100A9 | 0.645251 | 4 | 0 | 4 |
| TINCR | ST14 | 0.644797 | 5 | 0 | 5 |
| TINCR | PRKCH | 0.642974 | 5 | 0 | 5 |
| TINCR | CALB2 | 0.642156 | 3 | 0 | 3 |
| TINCR | MAB21L3 | 0.641331 | 3 | 0 | 3 |
For details and further investigation, click here
