| Full name: translation machinery associated 16 homolog | Alias Symbol: FLJ11184 | ||
| Type: protein-coding gene | Cytoband: 4q32.2 | ||
| Entrez ID: 55319 | HGNC ID: HGNC:25638 | Ensembl Gene: ENSG00000198498 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Screen Evidence:
| |||
Expression of TMA16:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TMA16 | 55319 | 218513_at | 0.7801 | 0.1500 | |
| GSE20347 | TMA16 | 55319 | 218513_at | 0.4837 | 0.0091 | |
| GSE23400 | TMA16 | 55319 | 218513_at | 0.1737 | 0.0000 | |
| GSE26886 | TMA16 | 55319 | 218513_at | -0.3267 | 0.4260 | |
| GSE29001 | TMA16 | 55319 | 218513_at | 0.7927 | 0.0494 | |
| GSE38129 | TMA16 | 55319 | 218513_at | 0.6037 | 0.0004 | |
| GSE45670 | TMA16 | 55319 | 218513_at | 0.2341 | 0.3815 | |
| GSE53622 | TMA16 | 55319 | 13308 | 0.2353 | 0.0044 | |
| GSE53624 | TMA16 | 55319 | 13308 | 0.4329 | 0.0000 | |
| GSE63941 | TMA16 | 55319 | 218513_at | -0.5630 | 0.4649 | |
| GSE77861 | TMA16 | 55319 | 218513_at | 0.4099 | 0.0626 | |
| SRP007169 | TMA16 | 55319 | RNAseq | 0.5912 | 0.1427 | |
| SRP008496 | TMA16 | 55319 | RNAseq | 0.5250 | 0.0345 | |
| SRP064894 | TMA16 | 55319 | RNAseq | 0.2410 | 0.0871 | |
| SRP133303 | TMA16 | 55319 | RNAseq | 0.7688 | 0.0001 | |
| SRP159526 | TMA16 | 55319 | RNAseq | 0.3918 | 0.0605 | |
| SRP193095 | TMA16 | 55319 | RNAseq | 0.1801 | 0.1259 | |
| SRP219564 | TMA16 | 55319 | RNAseq | 0.0539 | 0.8477 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by TMA16 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of TMA16:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TMA16 | 55319 | 0 | 11 | 19 | |
| GSE20123 | TMA16 | 55319 | 0 | 11 | 19 | |
| GSE43470 | TMA16 | 55319 | 0 | 14 | 29 | |
| GSE46452 | TMA16 | 55319 | 1 | 36 | 22 | |
| GSE47630 | TMA16 | 55319 | 0 | 22 | 18 | |
| GSE54993 | TMA16 | 55319 | 10 | 0 | 60 | |
| GSE54994 | TMA16 | 55319 | 1 | 12 | 40 | |
| GSE60625 | TMA16 | 55319 | 0 | 0 | 11 | |
| GSE74703 | TMA16 | 55319 | 0 | 12 | 24 | |
| GSE74704 | TMA16 | 55319 | 0 | 5 | 15 | |
| TCGA | TMA16 | 55319 | 10 | 34 | 52 |
Total number of gains: 22; Total number of losses: 157; Total Number of normals: 309.
Somatic mutations of TMA16:
Generating mutation plots.
Highly correlated genes for TMA16:
Showing top 20/531 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TMA16 | MAD2L1 | 0.672756 | 9 | 0 | 7 |
| TMA16 | B4GALT3 | 0.649964 | 3 | 0 | 3 |
| TMA16 | SNRPG | 0.645976 | 5 | 0 | 5 |
| TMA16 | ZNF473 | 0.643627 | 3 | 0 | 3 |
| TMA16 | RCN2 | 0.64229 | 5 | 0 | 4 |
| TMA16 | CCDC102B | 0.637464 | 3 | 0 | 3 |
| TMA16 | MACF1 | 0.635834 | 3 | 0 | 3 |
| TMA16 | UQCC1 | 0.63063 | 4 | 0 | 3 |
| TMA16 | NOL11 | 0.627976 | 8 | 0 | 6 |
| TMA16 | ZNF644 | 0.622976 | 4 | 0 | 4 |
| TMA16 | PLIN2 | 0.621747 | 3 | 0 | 3 |
| TMA16 | ANAPC10 | 0.62111 | 10 | 0 | 8 |
| TMA16 | EXOSC5 | 0.618862 | 5 | 0 | 4 |
| TMA16 | PDS5B | 0.617971 | 7 | 0 | 6 |
| TMA16 | ABCE1 | 0.615629 | 9 | 0 | 8 |
| TMA16 | TFB2M | 0.61453 | 9 | 0 | 7 |
| TMA16 | TBPL1 | 0.614454 | 7 | 0 | 5 |
| TMA16 | SNRPB2 | 0.614388 | 7 | 0 | 4 |
| TMA16 | PLOD2 | 0.613811 | 4 | 0 | 4 |
| TMA16 | ATG4C | 0.613364 | 3 | 0 | 3 |
For details and further investigation, click here
