TNS4

 

Full name: tensin 4 Alias Symbol: CTEN
Type: protein-coding gene Cytoband: 17q21.2
Entrez ID: 84951 HGNC ID: HGNC:24352 Ensembl Gene: ENSG00000131746 OMIM ID: 608385
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of TNS4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TNS4 84951 230398_at 1.4376 0.0535
GSE20347 TNS4 84951 222265_at 0.3811 0.0051
GSE23400 TNS4 84951 222265_at 0.2368 0.0009
GSE26886 TNS4 84951 230398_at 1.1276 0.0000
GSE29001 TNS4 84951 222265_at 0.1022 0.5905
GSE38129 TNS4 84951 222265_at 0.3478 0.0034
GSE45670 TNS4 84951 230398_at 0.9163 0.0019
GSE53622 TNS4 84951 99531 1.0388 0.0000
GSE53624 TNS4 84951 99531 0.8877 0.0000
GSE63941 TNS4 84951 230398_at 2.1152 0.0037
GSE77861 TNS4 84951 230398_at 0.9722 0.0070
GSE97050 TNS4 84951 A_23_P207850 1.5425 0.1239
SRP007169 TNS4 84951 RNAseq 2.3716 0.0000
SRP008496 TNS4 84951 RNAseq 1.6981 0.0000
SRP064894 TNS4 84951 RNAseq 0.9370 0.0439
SRP133303 TNS4 84951 RNAseq 1.6478 0.0000
SRP159526 TNS4 84951 RNAseq 0.2945 0.5088
SRP193095 TNS4 84951 RNAseq 1.5724 0.0000
SRP219564 TNS4 84951 RNAseq 1.8705 0.0908
TCGA TNS4 84951 RNAseq 1.4178 0.0000

Upregulated datasets: 8; Downregulated datasets: 0.  


 

Survival by TNS4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of TNS4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TNS4 84951 7 1 22
GSE20123 TNS4 84951 7 1 22
GSE43470 TNS4 84951 1 2 40
GSE46452 TNS4 84951 34 0 25
GSE47630 TNS4 84951 8 1 31
GSE54993 TNS4 84951 3 4 63
GSE54994 TNS4 84951 8 5 40
GSE60625 TNS4 84951 4 0 7
GSE74703 TNS4 84951 1 1 34
GSE74704 TNS4 84951 5 1 14
TCGA TNS4 84951 24 8 64

Total number of gains: 102; Total number of losses: 24; Total Number of normals: 362.  


 

Somatic mutations of TNS4:

 

Generating mutation plots.

 

Highly correlated genes for TNS4:

 

Showing top 20/1379 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TNS4LINGO10.784386303
TNS4ZAP700.774973303
TNS4SLC38A100.75764303
TNS4EPN10.727791505
TNS4ADAMTS140.727485404
TNS4COPB10.726186303
TNS4CERCAM0.725836303
TNS4ITGB40.7214713013
TNS4CREB50.720907303
TNS4DHX330.711286403
TNS4STX160.708712403
TNS4OCIAD20.70527806
TNS4ZNF1140.70152404
TNS4KLF100.699133303
TNS4EME10.696719606
TNS4PGM2L10.695452403
TNS4RTKN0.694194807
TNS4AJUBA0.69125505
TNS4PDGFC0.691012303
TNS4ITGB60.685387303

For details and further investigation, click here