Full name: coatomer protein complex subunit beta 1 | Alias Symbol: | ||
Type: protein-coding gene | Cytoband: 11p15.2 | ||
Entrez ID: 1315 | HGNC ID: HGNC:2231 | Ensembl Gene: ENSG00000129083 | OMIM ID: 600959 |
Drug and gene relationship at DGIdb |
Expression of COPB1:
Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
---|---|---|---|---|---|---|
GSE17351 | COPB1 | 1315 | 201358_s_at | 0.2352 | 0.3553 | |
GSE20347 | COPB1 | 1315 | 201358_s_at | 0.0414 | 0.7755 | |
GSE23400 | COPB1 | 1315 | 201358_s_at | 0.3347 | 0.0000 | |
GSE26886 | COPB1 | 1315 | 201358_s_at | 0.6555 | 0.0005 | |
GSE29001 | COPB1 | 1315 | 201358_s_at | 0.0105 | 0.9691 | |
GSE38129 | COPB1 | 1315 | 201358_s_at | 0.0549 | 0.6015 | |
GSE45670 | COPB1 | 1315 | 201358_s_at | 0.1843 | 0.0628 | |
GSE53622 | COPB1 | 1315 | 12439 | -0.0304 | 0.6172 | |
GSE53624 | COPB1 | 1315 | 12439 | 0.0499 | 0.3468 | |
GSE63941 | COPB1 | 1315 | 201358_s_at | -0.2513 | 0.4498 | |
GSE77861 | COPB1 | 1315 | 201358_s_at | 0.4388 | 0.2658 | |
GSE97050 | COPB1 | 1315 | A_33_P3287263 | 0.0820 | 0.8180 | |
SRP007169 | COPB1 | 1315 | RNAseq | -0.3964 | 0.2174 | |
SRP008496 | COPB1 | 1315 | RNAseq | -0.2058 | 0.3031 | |
SRP064894 | COPB1 | 1315 | RNAseq | -0.0701 | 0.7327 | |
SRP133303 | COPB1 | 1315 | RNAseq | 0.7923 | 0.0124 | |
SRP159526 | COPB1 | 1315 | RNAseq | -0.2962 | 0.2878 | |
SRP193095 | COPB1 | 1315 | RNAseq | -0.1749 | 0.1865 | |
SRP219564 | COPB1 | 1315 | RNAseq | 0.0187 | 0.9284 | |
TCGA | COPB1 | 1315 | RNAseq | -0.0101 | 0.8075 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by COPB1 expression:
Note: Click image to view full size file.
Copy number change of COPB1:
Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
---|---|---|---|---|---|---|
GSE15526 | COPB1 | 1315 | 1 | 10 | 19 | |
GSE20123 | COPB1 | 1315 | 1 | 10 | 19 | |
GSE43470 | COPB1 | 1315 | 1 | 5 | 37 | |
GSE46452 | COPB1 | 1315 | 7 | 5 | 47 | |
GSE47630 | COPB1 | 1315 | 3 | 11 | 26 | |
GSE54993 | COPB1 | 1315 | 3 | 1 | 66 | |
GSE54994 | COPB1 | 1315 | 4 | 12 | 37 | |
GSE60625 | COPB1 | 1315 | 0 | 0 | 11 | |
GSE74703 | COPB1 | 1315 | 1 | 3 | 32 | |
GSE74704 | COPB1 | 1315 | 0 | 9 | 11 | |
TCGA | COPB1 | 1315 | 12 | 31 | 53 |
Total number of gains: 33; Total number of losses: 97; Total Number of normals: 358.
Somatic mutations of COPB1:
Generating mutation plots.
Highly correlated genes for COPB1:
Showing top 20/547 corelated genes with mean PCC>0.5.
Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
---|---|---|---|---|---|
COPB1 | DUT | 0.769149 | 3 | 0 | 3 |
COPB1 | SRRD | 0.765069 | 3 | 0 | 3 |
COPB1 | CEP120 | 0.737751 | 3 | 0 | 3 |
COPB1 | AGMAT | 0.734928 | 3 | 0 | 3 |
COPB1 | CSNK1G2 | 0.728983 | 5 | 0 | 4 |
COPB1 | TNS4 | 0.726186 | 3 | 0 | 3 |
COPB1 | TNFRSF10B | 0.718767 | 5 | 0 | 4 |
COPB1 | PAIP1 | 0.713929 | 3 | 0 | 3 |
COPB1 | RBBP6 | 0.712882 | 3 | 0 | 3 |
COPB1 | MGAT4B | 0.711114 | 3 | 0 | 3 |
COPB1 | KLF7 | 0.707533 | 3 | 0 | 3 |
COPB1 | LRP5L | 0.706123 | 3 | 0 | 3 |
COPB1 | PDIA6 | 0.706006 | 4 | 0 | 3 |
COPB1 | TWSG1 | 0.704154 | 3 | 0 | 3 |
COPB1 | CASP4 | 0.703891 | 3 | 0 | 3 |
COPB1 | XRN1 | 0.703608 | 3 | 0 | 3 |
COPB1 | CEP250 | 0.696042 | 3 | 0 | 3 |
COPB1 | MAPK6 | 0.695747 | 5 | 0 | 4 |
COPB1 | WDR43 | 0.694602 | 5 | 0 | 4 |
COPB1 | TOR1AIP2 | 0.694233 | 4 | 0 | 4 |
For details and further investigation, click here