TP53TG1

 

Full name: TP53 target 1 Alias Symbol: H_RG012D21.9|LINC00096
Type: non-coding RNA Cytoband: 7q21.12
Entrez ID: 11257 HGNC ID: HGNC:17026 Ensembl Gene: ENSG00000182165 OMIM ID: 616403
Drug and gene relationship at DGIdb

 

Expression of TP53TG1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TP53TG1 11257 210886_x_at 0.1421 0.6730
GSE20347 TP53TG1 11257 210886_x_at -0.0579 0.8023
GSE23400 TP53TG1 11257 210886_x_at 0.0385 0.6632
GSE26886 TP53TG1 11257 209917_s_at 1.3652 0.0000
GSE29001 TP53TG1 11257 210886_x_at -0.4439 0.0686
GSE38129 TP53TG1 11257 210886_x_at -0.0484 0.7916
GSE45670 TP53TG1 11257 210886_x_at 0.1634 0.5012
GSE53622 TP53TG1 11257 8685 -0.0606 0.3640
GSE53624 TP53TG1 11257 8685 -0.1164 0.0209
GSE63941 TP53TG1 11257 210886_x_at -0.5459 0.6084
GSE77861 TP53TG1 11257 209917_s_at -0.2229 0.4539
SRP007169 TP53TG1 11257 RNAseq -1.4624 0.0009
SRP008496 TP53TG1 11257 RNAseq -0.1397 0.7471
SRP064894 TP53TG1 11257 RNAseq 0.2831 0.4096
SRP133303 TP53TG1 11257 RNAseq 0.2554 0.3247
SRP159526 TP53TG1 11257 RNAseq -0.2650 0.4729
SRP193095 TP53TG1 11257 RNAseq -0.2197 0.2638
SRP219564 TP53TG1 11257 RNAseq 0.3016 0.3837
TCGA TP53TG1 11257 RNAseq 0.1659 0.0947

Upregulated datasets: 1; Downregulated datasets: 1.  


 

Survival by TP53TG1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of TP53TG1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TP53TG1 11257 13 1 16
GSE20123 TP53TG1 11257 13 1 16
GSE43470 TP53TG1 11257 5 1 37
GSE46452 TP53TG1 11257 12 0 47
GSE47630 TP53TG1 11257 8 2 30
GSE54993 TP53TG1 11257 2 7 61
GSE54994 TP53TG1 11257 17 2 34
GSE60625 TP53TG1 11257 0 0 11
GSE74703 TP53TG1 11257 4 1 31
GSE74704 TP53TG1 11257 9 1 10
TCGA TP53TG1 11257 54 4 38

Total number of gains: 137; Total number of losses: 20; Total Number of normals: 331.  


 

Somatic mutations of TP53TG1:

 

Generating mutation plots.

 

Highly correlated genes for TP53TG1:

 

Showing top 20/38 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TP53TG1CHST140.703979303
TP53TG1PXMP20.675622303
TP53TG1BUD310.652946404
TP53TG1CHCHD20.6463404
TP53TG1BRI30.635646403
TP53TG1TESK10.628362303
TP53TG1HCFC1R10.622283403
TP53TG1FBXL150.589749303
TP53TG1RITA10.579922504
TP53TG1BCL7C0.578603503
TP53TG1GPRC5C0.573165503
TP53TG1PEX100.572947403
TP53TG1ZNHIT10.570476605
TP53TG1NSMCE10.570184403
TP53TG1DYNLRB10.565481303
TP53TG1VPS33A0.56075303
TP53TG1GPNMB0.559576403
TP53TG1RPL190.559208403
TP53TG1RHBDD20.559139303
TP53TG1CPT1A0.557182403

For details and further investigation, click here