| Full name: trafficking protein particle complex 12 | Alias Symbol: CGI-87|TTC-15 | ||
| Type: protein-coding gene | Cytoband: 2p25.3 | ||
| Entrez ID: 51112 | HGNC ID: HGNC:24284 | Ensembl Gene: ENSG00000171853 | OMIM ID: 614139 |
| Drug and gene relationship at DGIdb | |||
Expression of TRAPPC12:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TRAPPC12 | 51112 | 203122_at | 0.1765 | 0.6462 | |
| GSE20347 | TRAPPC12 | 51112 | 203122_at | -0.0644 | 0.7570 | |
| GSE23400 | TRAPPC12 | 51112 | 203122_at | 0.0110 | 0.8545 | |
| GSE26886 | TRAPPC12 | 51112 | 203122_at | 0.0778 | 0.6511 | |
| GSE29001 | TRAPPC12 | 51112 | 203122_at | -0.1054 | 0.7512 | |
| GSE38129 | TRAPPC12 | 51112 | 203122_at | -0.1376 | 0.2677 | |
| GSE45670 | TRAPPC12 | 51112 | 203122_at | -0.0995 | 0.3892 | |
| GSE53622 | TRAPPC12 | 51112 | 86307 | -0.1943 | 0.0024 | |
| GSE53624 | TRAPPC12 | 51112 | 86307 | -0.2429 | 0.0000 | |
| GSE63941 | TRAPPC12 | 51112 | 203122_at | -1.2173 | 0.0006 | |
| GSE77861 | TRAPPC12 | 51112 | 203122_at | 0.3156 | 0.0832 | |
| SRP007169 | TRAPPC12 | 51112 | RNAseq | -0.1010 | 0.8111 | |
| SRP008496 | TRAPPC12 | 51112 | RNAseq | -0.1127 | 0.7144 | |
| SRP064894 | TRAPPC12 | 51112 | RNAseq | 0.1965 | 0.3617 | |
| SRP133303 | TRAPPC12 | 51112 | RNAseq | -0.0387 | 0.8030 | |
| SRP159526 | TRAPPC12 | 51112 | RNAseq | 0.0832 | 0.8116 | |
| SRP193095 | TRAPPC12 | 51112 | RNAseq | 0.0832 | 0.4156 | |
| SRP219564 | TRAPPC12 | 51112 | RNAseq | -0.1634 | 0.6238 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by TRAPPC12 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of TRAPPC12:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TRAPPC12 | 51112 | 8 | 3 | 19 | |
| GSE20123 | TRAPPC12 | 51112 | 8 | 3 | 19 | |
| GSE43470 | TRAPPC12 | 51112 | 3 | 1 | 39 | |
| GSE46452 | TRAPPC12 | 51112 | 3 | 4 | 52 | |
| GSE47630 | TRAPPC12 | 51112 | 7 | 0 | 33 | |
| GSE54993 | TRAPPC12 | 51112 | 1 | 7 | 62 | |
| GSE54994 | TRAPPC12 | 51112 | 12 | 1 | 40 | |
| GSE60625 | TRAPPC12 | 51112 | 0 | 3 | 8 | |
| GSE74703 | TRAPPC12 | 51112 | 3 | 0 | 33 | |
| GSE74704 | TRAPPC12 | 51112 | 8 | 1 | 11 | |
| TCGA | TRAPPC12 | 51112 | 32 | 6 | 58 |
Total number of gains: 85; Total number of losses: 29; Total Number of normals: 374.
Somatic mutations of TRAPPC12:
Generating mutation plots.
Highly correlated genes for TRAPPC12:
Showing top 20/21 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TRAPPC12 | BDNF | 0.727017 | 3 | 0 | 3 |
| TRAPPC12 | USP35 | 0.622984 | 3 | 0 | 3 |
| TRAPPC12 | QRFPR | 0.590229 | 3 | 0 | 3 |
| TRAPPC12 | FBN2 | 0.585123 | 3 | 0 | 3 |
| TRAPPC12 | PLEKHM3 | 0.581889 | 3 | 0 | 3 |
| TRAPPC12 | NDUFAF7 | 0.574461 | 3 | 0 | 3 |
| TRAPPC12 | SCYL1 | 0.569694 | 3 | 0 | 3 |
| TRAPPC12 | B3GALT2 | 0.568476 | 3 | 0 | 3 |
| TRAPPC12 | PPP3R1 | 0.549433 | 3 | 0 | 3 |
| TRAPPC12 | UTP20 | 0.549325 | 4 | 0 | 3 |
| TRAPPC12 | TBL1X | 0.545726 | 4 | 0 | 3 |
| TRAPPC12 | PPM1G | 0.537842 | 4 | 0 | 3 |
| TRAPPC12 | GCLC | 0.534534 | 3 | 0 | 3 |
| TRAPPC12 | TRIM35 | 0.533233 | 4 | 0 | 3 |
| TRAPPC12 | ERCC3 | 0.525358 | 6 | 0 | 3 |
| TRAPPC12 | ZBTB2 | 0.517097 | 4 | 0 | 3 |
| TRAPPC12 | MPHOSPH10 | 0.515132 | 5 | 0 | 3 |
| TRAPPC12 | RPS7 | 0.513669 | 5 | 0 | 3 |
| TRAPPC12 | NDUFAF3 | 0.510673 | 5 | 0 | 3 |
| TRAPPC12 | ILKAP | 0.507414 | 6 | 0 | 3 |
For details and further investigation, click here
