| Full name: TSC22D1 antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 13q14.11 | ||
| Entrez ID: 641467 | HGNC ID: HGNC:43684 | Ensembl Gene: ENSG00000278156 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of TSC22D1-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TSC22D1-AS1 | 641467 | 237745_at | -0.1009 | 0.8907 | |
| GSE26886 | TSC22D1-AS1 | 641467 | 237745_at | 0.6823 | 0.1006 | |
| GSE45670 | TSC22D1-AS1 | 641467 | 237745_at | -0.2542 | 0.1358 | |
| GSE53622 | TSC22D1-AS1 | 641467 | 40696 | -0.4196 | 0.0015 | |
| GSE53624 | TSC22D1-AS1 | 641467 | 40696 | -0.2266 | 0.0231 | |
| GSE63941 | TSC22D1-AS1 | 641467 | 237745_at | -0.8644 | 0.0002 | |
| GSE77861 | TSC22D1-AS1 | 641467 | 237745_at | 0.0689 | 0.5724 | |
| SRP133303 | TSC22D1-AS1 | 641467 | RNAseq | -0.2712 | 0.1663 | |
| SRP159526 | TSC22D1-AS1 | 641467 | RNAseq | -0.6701 | 0.0690 | |
| SRP193095 | TSC22D1-AS1 | 641467 | RNAseq | 0.0804 | 0.6212 | |
| SRP219564 | TSC22D1-AS1 | 641467 | RNAseq | -0.4158 | 0.2949 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by TSC22D1-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of TSC22D1-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TSC22D1-AS1 | 641467 | 0 | 13 | 17 | |
| GSE20123 | TSC22D1-AS1 | 641467 | 0 | 12 | 18 | |
| GSE43470 | TSC22D1-AS1 | 641467 | 3 | 13 | 27 | |
| GSE46452 | TSC22D1-AS1 | 641467 | 0 | 33 | 26 | |
| GSE47630 | TSC22D1-AS1 | 641467 | 2 | 27 | 11 | |
| GSE54993 | TSC22D1-AS1 | 641467 | 12 | 2 | 56 | |
| GSE54994 | TSC22D1-AS1 | 641467 | 1 | 16 | 36 | |
| GSE60625 | TSC22D1-AS1 | 641467 | 0 | 3 | 8 | |
| GSE74703 | TSC22D1-AS1 | 641467 | 3 | 10 | 23 | |
| GSE74704 | TSC22D1-AS1 | 641467 | 0 | 9 | 11 |
Total number of gains: 21; Total number of losses: 138; Total Number of normals: 233.
Somatic mutations of TSC22D1-AS1:
Generating mutation plots.
Highly correlated genes for TSC22D1-AS1:
Showing top 20/135 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TSC22D1-AS1 | TMEM150A | 0.715344 | 3 | 0 | 3 |
| TSC22D1-AS1 | GLIS3 | 0.714861 | 3 | 0 | 3 |
| TSC22D1-AS1 | VAT1L | 0.702013 | 3 | 0 | 3 |
| TSC22D1-AS1 | ARNT2 | 0.688016 | 3 | 0 | 3 |
| TSC22D1-AS1 | BVES | 0.681544 | 3 | 0 | 3 |
| TSC22D1-AS1 | R3HDM2 | 0.672695 | 3 | 0 | 3 |
| TSC22D1-AS1 | FKBP7 | 0.670515 | 3 | 0 | 3 |
| TSC22D1-AS1 | EPC2 | 0.667619 | 3 | 0 | 3 |
| TSC22D1-AS1 | ZNF559 | 0.662187 | 3 | 0 | 3 |
| TSC22D1-AS1 | SACS | 0.660976 | 3 | 0 | 3 |
| TSC22D1-AS1 | PKD2 | 0.658038 | 4 | 0 | 3 |
| TSC22D1-AS1 | TRAK2 | 0.656851 | 3 | 0 | 3 |
| TSC22D1-AS1 | BMPR1A | 0.656406 | 4 | 0 | 3 |
| TSC22D1-AS1 | SLC39A13 | 0.652097 | 3 | 0 | 3 |
| TSC22D1-AS1 | CLIP3 | 0.638922 | 4 | 0 | 3 |
| TSC22D1-AS1 | ING1 | 0.633401 | 3 | 0 | 3 |
| TSC22D1-AS1 | FZD7 | 0.63279 | 4 | 0 | 4 |
| TSC22D1-AS1 | VAMP4 | 0.631113 | 5 | 0 | 4 |
| TSC22D1-AS1 | IL17D | 0.631022 | 4 | 0 | 4 |
| TSC22D1-AS1 | COLEC12 | 0.630721 | 3 | 0 | 3 |
For details and further investigation, click here
