| Full name: tetratricopeptide repeat domain 30A | Alias Symbol: FLJ13946|IFT70A | ||
| Type: protein-coding gene | Cytoband: 2q31.2 | ||
| Entrez ID: 92104 | HGNC ID: HGNC:25853 | Ensembl Gene: ENSG00000197557 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of TTC30A:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TTC30A | 92104 | 213679_at | 0.7524 | 0.0858 | |
| GSE20347 | TTC30A | 92104 | 213679_at | 0.4049 | 0.0283 | |
| GSE23400 | TTC30A | 92104 | 213679_at | 0.1450 | 0.0048 | |
| GSE26886 | TTC30A | 92104 | 213679_at | 1.0763 | 0.0007 | |
| GSE29001 | TTC30A | 92104 | 213679_at | 0.7075 | 0.0124 | |
| GSE38129 | TTC30A | 92104 | 213679_at | 0.6212 | 0.0006 | |
| GSE45670 | TTC30A | 92104 | 213679_at | 0.7150 | 0.0100 | |
| GSE63941 | TTC30A | 92104 | 213679_at | -0.5277 | 0.4176 | |
| GSE77861 | TTC30A | 92104 | 213679_at | 0.2208 | 0.1019 | |
| GSE97050 | TTC30A | 92104 | A_24_P17453 | 0.0623 | 0.7835 | |
| SRP007169 | TTC30A | 92104 | RNAseq | 0.6546 | 0.1864 | |
| SRP008496 | TTC30A | 92104 | RNAseq | 0.7053 | 0.0640 | |
| SRP064894 | TTC30A | 92104 | RNAseq | 0.6023 | 0.0214 | |
| SRP133303 | TTC30A | 92104 | RNAseq | 0.6536 | 0.0044 | |
| SRP159526 | TTC30A | 92104 | RNAseq | 0.9848 | 0.0087 | |
| SRP193095 | TTC30A | 92104 | RNAseq | 0.8059 | 0.0000 | |
| SRP219564 | TTC30A | 92104 | RNAseq | 0.3203 | 0.5333 | |
| TCGA | TTC30A | 92104 | RNAseq | 0.1109 | 0.2290 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by TTC30A expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of TTC30A:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TTC30A | 92104 | 10 | 0 | 20 | |
| GSE20123 | TTC30A | 92104 | 9 | 0 | 21 | |
| GSE43470 | TTC30A | 92104 | 5 | 1 | 37 | |
| GSE46452 | TTC30A | 92104 | 1 | 4 | 54 | |
| GSE47630 | TTC30A | 92104 | 4 | 4 | 32 | |
| GSE54993 | TTC30A | 92104 | 0 | 5 | 65 | |
| GSE54994 | TTC30A | 92104 | 11 | 4 | 38 | |
| GSE60625 | TTC30A | 92104 | 0 | 3 | 8 | |
| GSE74703 | TTC30A | 92104 | 4 | 1 | 31 | |
| GSE74704 | TTC30A | 92104 | 5 | 0 | 15 | |
| TCGA | TTC30A | 92104 | 28 | 6 | 62 |
Total number of gains: 77; Total number of losses: 28; Total Number of normals: 383.
Somatic mutations of TTC30A:
Generating mutation plots.
Highly correlated genes for TTC30A:
Showing top 20/263 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TTC30A | WRAP73 | 0.70912 | 4 | 0 | 4 |
| TTC30A | ZFP69 | 0.702204 | 3 | 0 | 3 |
| TTC30A | SPSB2 | 0.668716 | 3 | 0 | 3 |
| TTC30A | VANGL2 | 0.667356 | 3 | 0 | 3 |
| TTC30A | ALX1 | 0.666776 | 3 | 0 | 3 |
| TTC30A | RHPN2 | 0.655805 | 4 | 0 | 4 |
| TTC30A | ZNF670 | 0.653684 | 4 | 0 | 3 |
| TTC30A | GDA | 0.649709 | 3 | 0 | 3 |
| TTC30A | ANO1 | 0.646795 | 5 | 0 | 5 |
| TTC30A | ANKRD39 | 0.645136 | 3 | 0 | 3 |
| TTC30A | EDARADD | 0.642155 | 3 | 0 | 3 |
| TTC30A | CCDC34 | 0.638152 | 5 | 0 | 3 |
| TTC30A | ZBTB24 | 0.633695 | 5 | 0 | 5 |
| TTC30A | HOXC9 | 0.633183 | 5 | 0 | 5 |
| TTC30A | LYPD6B | 0.629234 | 4 | 0 | 3 |
| TTC30A | C2CD3 | 0.627576 | 4 | 0 | 4 |
| TTC30A | INHBB | 0.627068 | 4 | 0 | 3 |
| TTC30A | PHF12 | 0.625626 | 5 | 0 | 4 |
| TTC30A | CDCA5 | 0.624023 | 4 | 0 | 3 |
| TTC30A | TCHH | 0.621771 | 4 | 0 | 3 |
For details and further investigation, click here
