| Full name: ubiquitin family domain containing 1 | Alias Symbol: FLJ42145|FLJ38870|UBPH | ||
| Type: protein-coding gene | Cytoband: 16p12.2 | ||
| Entrez ID: 56061 | HGNC ID: HGNC:30565 | Ensembl Gene: ENSG00000103353 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of UBFD1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | UBFD1 | 56061 | 224878_at | 0.4673 | 0.3277 | |
| GSE20347 | UBFD1 | 56061 | 205687_at | 0.4220 | 0.0841 | |
| GSE23400 | UBFD1 | 56061 | 205687_at | 0.3596 | 0.0000 | |
| GSE26886 | UBFD1 | 56061 | 224878_at | -0.2839 | 0.0222 | |
| GSE29001 | UBFD1 | 56061 | 205687_at | 0.6759 | 0.0618 | |
| GSE38129 | UBFD1 | 56061 | 205687_at | 0.6399 | 0.0006 | |
| GSE45670 | UBFD1 | 56061 | 224878_at | 0.3450 | 0.0054 | |
| GSE53622 | UBFD1 | 56061 | 4205 | 0.5622 | 0.0000 | |
| GSE53624 | UBFD1 | 56061 | 4205 | 0.7562 | 0.0000 | |
| GSE63941 | UBFD1 | 56061 | 224878_at | -1.3497 | 0.0006 | |
| GSE77861 | UBFD1 | 56061 | 224878_at | 0.1375 | 0.2790 | |
| GSE97050 | UBFD1 | 56061 | A_23_P15123 | 0.3682 | 0.1791 | |
| SRP007169 | UBFD1 | 56061 | RNAseq | 0.5254 | 0.1511 | |
| SRP008496 | UBFD1 | 56061 | RNAseq | 0.5747 | 0.0078 | |
| SRP064894 | UBFD1 | 56061 | RNAseq | 0.2096 | 0.0904 | |
| SRP133303 | UBFD1 | 56061 | RNAseq | 0.7375 | 0.0000 | |
| SRP159526 | UBFD1 | 56061 | RNAseq | 0.5522 | 0.0002 | |
| SRP193095 | UBFD1 | 56061 | RNAseq | 0.4307 | 0.0000 | |
| SRP219564 | UBFD1 | 56061 | RNAseq | 0.4411 | 0.1818 | |
| TCGA | UBFD1 | 56061 | RNAseq | 0.0784 | 0.1028 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by UBFD1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of UBFD1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | UBFD1 | 56061 | 6 | 4 | 20 | |
| GSE20123 | UBFD1 | 56061 | 6 | 3 | 21 | |
| GSE43470 | UBFD1 | 56061 | 3 | 3 | 37 | |
| GSE46452 | UBFD1 | 56061 | 38 | 1 | 20 | |
| GSE47630 | UBFD1 | 56061 | 11 | 6 | 23 | |
| GSE54993 | UBFD1 | 56061 | 3 | 5 | 62 | |
| GSE54994 | UBFD1 | 56061 | 4 | 8 | 41 | |
| GSE60625 | UBFD1 | 56061 | 4 | 0 | 7 | |
| GSE74703 | UBFD1 | 56061 | 3 | 2 | 31 | |
| GSE74704 | UBFD1 | 56061 | 3 | 1 | 16 | |
| TCGA | UBFD1 | 56061 | 19 | 13 | 64 |
Total number of gains: 100; Total number of losses: 46; Total Number of normals: 342.
Somatic mutations of UBFD1:
Generating mutation plots.
Highly correlated genes for UBFD1:
Showing top 20/566 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| UBFD1 | SNAP47 | 0.745375 | 3 | 0 | 3 |
| UBFD1 | PYCR2 | 0.724977 | 3 | 0 | 3 |
| UBFD1 | ERLEC1 | 0.723841 | 3 | 0 | 3 |
| UBFD1 | AIDA | 0.708799 | 3 | 0 | 3 |
| UBFD1 | SLC19A1 | 0.70545 | 3 | 0 | 3 |
| UBFD1 | RNF26 | 0.698956 | 4 | 0 | 4 |
| UBFD1 | NOP56 | 0.686931 | 3 | 0 | 3 |
| UBFD1 | LEPR | 0.681322 | 3 | 0 | 3 |
| UBFD1 | NFKB1 | 0.679453 | 4 | 0 | 4 |
| UBFD1 | DCAF13 | 0.677937 | 5 | 0 | 5 |
| UBFD1 | LETM2 | 0.674976 | 3 | 0 | 3 |
| UBFD1 | SPNS1 | 0.673098 | 5 | 0 | 4 |
| UBFD1 | ENG | 0.672026 | 4 | 0 | 4 |
| UBFD1 | EMG1 | 0.667182 | 8 | 0 | 7 |
| UBFD1 | FAM89A | 0.666906 | 3 | 0 | 3 |
| UBFD1 | APLNR | 0.666676 | 4 | 0 | 3 |
| UBFD1 | TMEM200A | 0.66298 | 4 | 0 | 3 |
| UBFD1 | ANKIB1 | 0.662192 | 3 | 0 | 3 |
| UBFD1 | SLC2A10 | 0.66078 | 3 | 0 | 3 |
| UBFD1 | PSMD2 | 0.660518 | 9 | 0 | 9 |
For details and further investigation, click here
