| Full name: V-set and transmembrane domain containing 2A | Alias Symbol: MGC33530 | ||
| Type: protein-coding gene | Cytoband: 7p11.2 | ||
| Entrez ID: 222008 | HGNC ID: HGNC:28499 | Ensembl Gene: ENSG00000170419 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of VSTM2A:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | VSTM2A | 222008 | 1554530_at | -0.1405 | 0.4570 | |
| GSE26886 | VSTM2A | 222008 | 1554530_at | -0.0601 | 0.5221 | |
| GSE45670 | VSTM2A | 222008 | 1554530_at | 0.0972 | 0.1947 | |
| GSE53622 | VSTM2A | 222008 | 160720 | 0.5136 | 0.0001 | |
| GSE53624 | VSTM2A | 222008 | 160720 | 0.4062 | 0.0000 | |
| GSE63941 | VSTM2A | 222008 | 1554530_at | 0.0873 | 0.4961 | |
| GSE77861 | VSTM2A | 222008 | 1554530_at | -0.0514 | 0.5946 | |
| GSE97050 | VSTM2A | 222008 | A_33_P3347193 | 0.2172 | 0.4384 | |
| SRP133303 | VSTM2A | 222008 | RNAseq | 0.7311 | 0.0126 | |
| TCGA | VSTM2A | 222008 | RNAseq | -5.3469 | 0.0000 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by VSTM2A expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of VSTM2A:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | VSTM2A | 222008 | 13 | 0 | 17 | |
| GSE20123 | VSTM2A | 222008 | 12 | 0 | 18 | |
| GSE43470 | VSTM2A | 222008 | 6 | 0 | 37 | |
| GSE46452 | VSTM2A | 222008 | 13 | 0 | 46 | |
| GSE47630 | VSTM2A | 222008 | 10 | 1 | 29 | |
| GSE54993 | VSTM2A | 222008 | 0 | 12 | 58 | |
| GSE54994 | VSTM2A | 222008 | 18 | 1 | 34 | |
| GSE60625 | VSTM2A | 222008 | 0 | 0 | 11 | |
| GSE74703 | VSTM2A | 222008 | 6 | 0 | 30 | |
| GSE74704 | VSTM2A | 222008 | 6 | 0 | 14 | |
| TCGA | VSTM2A | 222008 | 54 | 7 | 35 |
Total number of gains: 138; Total number of losses: 21; Total Number of normals: 329.
Somatic mutations of VSTM2A:
Generating mutation plots.
Highly correlated genes for VSTM2A:
Showing top 20/43 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| VSTM2A | CYP4A11 | 0.773399 | 3 | 0 | 3 |
| VSTM2A | HCRT | 0.718529 | 4 | 0 | 4 |
| VSTM2A | ITGA10 | 0.696263 | 3 | 0 | 3 |
| VSTM2A | OR4D2 | 0.681214 | 3 | 0 | 3 |
| VSTM2A | TSSK2 | 0.673984 | 3 | 0 | 3 |
| VSTM2A | GPR146 | 0.645802 | 3 | 0 | 3 |
| VSTM2A | AMACR | 0.644463 | 3 | 0 | 3 |
| VSTM2A | OR2C1 | 0.642789 | 4 | 0 | 3 |
| VSTM2A | KIF17 | 0.626705 | 3 | 0 | 3 |
| VSTM2A | SLC22A8 | 0.609782 | 4 | 0 | 3 |
| VSTM2A | KIR2DS2 | 0.606494 | 3 | 0 | 3 |
| VSTM2A | TNP1 | 0.602627 | 4 | 0 | 4 |
| VSTM2A | IGFL1 | 0.598503 | 3 | 0 | 3 |
| VSTM2A | MAGEL2 | 0.590085 | 4 | 0 | 3 |
| VSTM2A | KLK4 | 0.58987 | 4 | 0 | 4 |
| VSTM2A | WDR87 | 0.587405 | 5 | 0 | 3 |
| VSTM2A | C3orf36 | 0.587373 | 4 | 0 | 3 |
| VSTM2A | ROM1 | 0.585375 | 4 | 0 | 3 |
| VSTM2A | SYCE3 | 0.582708 | 4 | 0 | 3 |
| VSTM2A | CNGB1 | 0.581694 | 4 | 0 | 3 |
For details and further investigation, click here
