WDR63

 

Full name: WD repeat domain 63 Alias Symbol: DIC3|FLJ30067|NYD-SP29
Type: protein-coding gene Cytoband: 1p22.3
Entrez ID: 126820 HGNC ID: HGNC:30711 Ensembl Gene: ENSG00000162643 OMIM ID: 617968
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of WDR63:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 WDR63 126820 243087_at -0.1732 0.3746
GSE26886 WDR63 126820 243087_at 0.1236 0.2411
GSE45670 WDR63 126820 243087_at 0.1000 0.3588
GSE53622 WDR63 126820 83034 -0.1665 0.1097
GSE53624 WDR63 126820 83034 -0.2483 0.0004
GSE63941 WDR63 126820 243087_at -2.5381 0.0000
GSE77861 WDR63 126820 243087_at -0.0280 0.8104
TCGA WDR63 126820 RNAseq -0.2857 0.5771

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by WDR63 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of WDR63:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 WDR63 126820 0 8 22
GSE20123 WDR63 126820 0 8 22
GSE43470 WDR63 126820 2 2 39
GSE46452 WDR63 126820 0 1 58
GSE47630 WDR63 126820 8 5 27
GSE54993 WDR63 126820 0 0 70
GSE54994 WDR63 126820 6 3 44
GSE60625 WDR63 126820 0 0 11
GSE74703 WDR63 126820 1 2 33
GSE74704 WDR63 126820 0 5 15
TCGA WDR63 126820 7 23 66

Total number of gains: 24; Total number of losses: 57; Total Number of normals: 407.  


 

Somatic mutations of WDR63:

 

Generating mutation plots.

 

Highly correlated genes for WDR63:

 

Showing top 20/31 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
WDR63DIXDC10.777683303
WDR63CNTN40.7405303
WDR63PRICKLE20.73602303
WDR63NAALADL10.703395303
WDR63DGKI0.70055303
WDR63C1QTNF20.68557303
WDR63C16orf860.683538303
WDR63KRTAP1-50.678734303
WDR63CDK150.673102403
WDR63COLEC120.67103403
WDR63AKAP120.670076303
WDR63ACSS30.658858303
WDR63DENND2A0.657197303
WDR63GVQW10.656196303
WDR63FBXL130.654934303
WDR63SMIM100.648293403
WDR63MAMDC20.6347303
WDR63LINC011400.632733403
WDR63TSHZ30.626198403
WDR63CYS10.624853303

For details and further investigation, click here