| Full name: long intergenic non-protein coding RNA 1140 | Alias Symbol: FLJ41676 | ||
| Type: non-coding RNA | Cytoband: 1p22.3 | ||
| Entrez ID: 339524 | HGNC ID: HGNC:27922 | Ensembl Gene: ENSG00000267272 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC01140:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC01140 | 339524 | 215039_at | -1.1421 | 0.0196 | |
| GSE20347 | LINC01140 | 339524 | 215039_at | -0.2298 | 0.0041 | |
| GSE23400 | LINC01140 | 339524 | 215039_at | -0.1397 | 0.0000 | |
| GSE26886 | LINC01140 | 339524 | 235870_at | 0.0937 | 0.4728 | |
| GSE29001 | LINC01140 | 339524 | 215039_at | -0.3627 | 0.0334 | |
| GSE38129 | LINC01140 | 339524 | 215039_at | -0.7285 | 0.0009 | |
| GSE45670 | LINC01140 | 339524 | 235870_at | 0.0986 | 0.3080 | |
| GSE53622 | LINC01140 | 339524 | 431 | 0.1646 | 0.0025 | |
| GSE53624 | LINC01140 | 339524 | 431 | 0.3314 | 0.0000 | |
| GSE63941 | LINC01140 | 339524 | 215039_at | -1.8154 | 0.0000 | |
| GSE77861 | LINC01140 | 339524 | 235870_at | -0.0974 | 0.2381 | |
| SRP064894 | LINC01140 | 339524 | RNAseq | -0.0749 | 0.8396 | |
| SRP133303 | LINC01140 | 339524 | RNAseq | -1.0582 | 0.0230 | |
| SRP159526 | LINC01140 | 339524 | RNAseq | -0.6766 | 0.2064 | |
| SRP219564 | LINC01140 | 339524 | RNAseq | -0.1579 | 0.8490 |
Upregulated datasets: 0; Downregulated datasets: 3.
Survival by LINC01140 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC01140:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC01140 | 339524 | 0 | 8 | 22 | |
| GSE20123 | LINC01140 | 339524 | 0 | 8 | 22 | |
| GSE43470 | LINC01140 | 339524 | 2 | 2 | 39 | |
| GSE46452 | LINC01140 | 339524 | 1 | 1 | 57 | |
| GSE47630 | LINC01140 | 339524 | 8 | 5 | 27 | |
| GSE54993 | LINC01140 | 339524 | 0 | 1 | 69 | |
| GSE54994 | LINC01140 | 339524 | 6 | 3 | 44 | |
| GSE60625 | LINC01140 | 339524 | 0 | 0 | 11 | |
| GSE74703 | LINC01140 | 339524 | 1 | 2 | 33 | |
| GSE74704 | LINC01140 | 339524 | 0 | 5 | 15 |
Total number of gains: 18; Total number of losses: 35; Total Number of normals: 339.
Somatic mutations of LINC01140:
Generating mutation plots.
Highly correlated genes for LINC01140:
Showing top 20/187 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC01140 | PGM5-AS1 | 0.828641 | 3 | 0 | 3 |
| LINC01140 | EMCN | 0.751959 | 4 | 0 | 4 |
| LINC01140 | CCDC69 | 0.744061 | 5 | 0 | 5 |
| LINC01140 | C7 | 0.732917 | 5 | 0 | 5 |
| LINC01140 | PNMA2 | 0.732711 | 3 | 0 | 3 |
| LINC01140 | DAB1 | 0.732147 | 3 | 0 | 3 |
| LINC01140 | TPO | 0.725858 | 3 | 0 | 3 |
| LINC01140 | CDK15 | 0.709334 | 3 | 0 | 3 |
| LINC01140 | ZBTB16 | 0.700428 | 5 | 0 | 5 |
| LINC01140 | SCN7A | 0.68275 | 5 | 0 | 4 |
| LINC01140 | MAML2 | 0.6819 | 3 | 0 | 3 |
| LINC01140 | GDPD5 | 0.673638 | 3 | 0 | 3 |
| LINC01140 | FAM184A | 0.670066 | 3 | 0 | 3 |
| LINC01140 | TK2 | 0.66981 | 3 | 0 | 3 |
| LINC01140 | PCDH9 | 0.666738 | 4 | 0 | 4 |
| LINC01140 | SPRY1 | 0.653082 | 6 | 0 | 5 |
| LINC01140 | SYDE1 | 0.64903 | 3 | 0 | 3 |
| LINC01140 | XPC | 0.64644 | 4 | 0 | 3 |
| LINC01140 | ZBTB20 | 0.645209 | 4 | 0 | 4 |
| LINC01140 | PAPPA | 0.6444 | 3 | 0 | 3 |
For details and further investigation, click here
