WNT10B

 

Full name: Wnt family member 10B Alias Symbol: WNT-12|SHFM6
Type: protein-coding gene Cytoband: 12q13.12
Entrez ID: 7480 HGNC ID: HGNC:12775 Ensembl Gene: ENSG00000169884 OMIM ID: 601906
Drug and gene relationship at DGIdb

 

WNT10B involved pathways:

KEGG pathway Description View
hsa04150mTOR signaling pathway
hsa04310Wnt signaling pathway
hsa04390Hippo signaling pathway
hsa04550Signaling pathways regulating pluripotency of stem cells
hsa04916Melanogenesis
hsa05166HTLV-I infection
hsa05200Pathways in cancer
hsa05205Proteoglycans in cancer
hsa05217Basal cell carcinoma

 

Expression of WNT10B:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 WNT10B 7480 206213_at 0.0212 0.9554
GSE20347 WNT10B 7480 206213_at 0.0084 0.9555
GSE23400 WNT10B 7480 206213_at -0.2048 0.0002
GSE26886 WNT10B 7480 206213_at 0.2909 0.0976
GSE29001 WNT10B 7480 206213_at -0.2958 0.1336
GSE38129 WNT10B 7480 206213_at -0.2109 0.2694
GSE45670 WNT10B 7480 206213_at -0.0394 0.8174
GSE53622 WNT10B 7480 4357 0.3911 0.1670
GSE53624 WNT10B 7480 4357 0.1308 0.5211
GSE63941 WNT10B 7480 206213_at 0.6022 0.0401
GSE77861 WNT10B 7480 206213_at 0.0443 0.7910
SRP064894 WNT10B 7480 RNAseq -1.0334 0.0041
SRP133303 WNT10B 7480 RNAseq -0.6962 0.1402
SRP159526 WNT10B 7480 RNAseq 0.4694 0.6050
SRP219564 WNT10B 7480 RNAseq 0.5784 0.2431
TCGA WNT10B 7480 RNAseq 0.4167 0.1757

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by WNT10B expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of WNT10B:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 WNT10B 7480 6 1 23
GSE20123 WNT10B 7480 6 1 23
GSE43470 WNT10B 7480 4 1 38
GSE46452 WNT10B 7480 8 1 50
GSE47630 WNT10B 7480 11 2 27
GSE54993 WNT10B 7480 0 5 65
GSE54994 WNT10B 7480 4 1 48
GSE60625 WNT10B 7480 0 0 11
GSE74703 WNT10B 7480 4 1 31
GSE74704 WNT10B 7480 4 1 15
TCGA WNT10B 7480 16 14 66

Total number of gains: 63; Total number of losses: 28; Total Number of normals: 397.  


 

Somatic mutations of WNT10B:

 

Generating mutation plots.

 

Highly correlated genes for WNT10B:

 

Showing top 20/628 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
WNT10BCHGA0.715676303
WNT10BPSG50.698053303
WNT10BSMARCD10.678652303
WNT10BDRP20.673814404
WNT10BZFHX20.667273505
WNT10BTTC9B0.66622303
WNT10BIHH0.666026505
WNT10BKRT350.665119303
WNT10BNOS10.658521605
WNT10BC2orf720.65689605
WNT10BFGF210.653238404
WNT10BPPP2R2B0.651731505
WNT10BLTK0.651033505
WNT10BIL130.647959404
WNT10BIFITM100.646966303
WNT10BTRIM620.636977303
WNT10BMYOG0.636534604
WNT10BGABRA60.63638303
WNT10BCRYBB10.635921503
WNT10BCPN10.635582403

For details and further investigation, click here