ZEB2

 

Full name: zinc finger E-box binding homeobox 2 Alias Symbol: KIAA0569|SIP-1|SIP1
Type: protein-coding gene Cytoband: 2q22.3
Entrez ID: 9839 HGNC ID: HGNC:14881 Ensembl Gene: ENSG00000169554 OMIM ID: 605802
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of ZEB2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZEB2 9839 228333_at -0.7509 0.2950
GSE20347 ZEB2 9839 203603_s_at 0.0594 0.8580
GSE23400 ZEB2 9839 203603_s_at -0.1129 0.2562
GSE26886 ZEB2 9839 228333_at -0.0879 0.8062
GSE29001 ZEB2 9839 203603_s_at 0.4957 0.2893
GSE38129 ZEB2 9839 203603_s_at -0.4962 0.2274
GSE45670 ZEB2 9839 203603_s_at -1.9392 0.0004
GSE53622 ZEB2 9839 236 -1.1357 0.0000
GSE53624 ZEB2 9839 236 -0.9537 0.0000
GSE63941 ZEB2 9839 203603_s_at -6.2303 0.0000
GSE77861 ZEB2 9839 233031_at 0.0580 0.5467
GSE97050 ZEB2 9839 A_33_P3243832 -0.2688 0.2852
SRP007169 ZEB2 9839 RNAseq 2.4139 0.0000
SRP008496 ZEB2 9839 RNAseq 3.1300 0.0000
SRP064894 ZEB2 9839 RNAseq 0.1257 0.7104
SRP133303 ZEB2 9839 RNAseq -0.4751 0.0367
SRP159526 ZEB2 9839 RNAseq -0.5429 0.2953
SRP193095 ZEB2 9839 RNAseq 0.8221 0.0014
SRP219564 ZEB2 9839 RNAseq -0.1306 0.7475
TCGA ZEB2 9839 RNAseq -0.3417 0.0006

Upregulated datasets: 2; Downregulated datasets: 3.  


 

Survival by ZEB2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ZEB2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZEB2 9839 4 3 23
GSE20123 ZEB2 9839 3 3 24
GSE43470 ZEB2 9839 3 1 39
GSE46452 ZEB2 9839 1 4 54
GSE47630 ZEB2 9839 5 3 32
GSE54993 ZEB2 9839 0 5 65
GSE54994 ZEB2 9839 10 2 41
GSE60625 ZEB2 9839 0 3 8
GSE74703 ZEB2 9839 2 1 33
GSE74704 ZEB2 9839 3 1 16
TCGA ZEB2 9839 22 11 63

Total number of gains: 53; Total number of losses: 37; Total Number of normals: 398.  


 

Somatic mutations of ZEB2:

 

Generating mutation plots.

 

Highly correlated genes for ZEB2:

 

Showing top 20/1131 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZEB2CLEC3B0.829393303
ZEB2CNRIP10.82676808
ZEB2ZNF5830.822365303
ZEB2CYP21A20.820904303
ZEB2NLGN4Y0.815437303
ZEB2SH3RF30.806784303
ZEB2PGM5-AS10.801646303
ZEB2BICC10.798543707
ZEB2FIBIN0.797948505
ZEB2DIXDC10.793167909
ZEB2LINC012790.790663404
ZEB2LINC010820.789269505
ZEB2NKAPL0.775443404
ZEB2ABCB40.775414303
ZEB2MRVI10.775195706
ZEB2SMPD10.774823404
ZEB2CCDC800.773854707
ZEB2MIR100HG0.763129606
ZEB2CCL140.760867303
ZEB2SCUBE30.760258303

For details and further investigation, click here