| Full name: zinc finger with KRAB and SCAN domains 3 | Alias Symbol: Zfp47|ZF47|ZSCAN35 | ||
| Type: protein-coding gene | Cytoband: 6p22.1 | ||
| Entrez ID: 80317 | HGNC ID: HGNC:13853 | Ensembl Gene: ENSG00000189298 | OMIM ID: 612791 |
| Drug and gene relationship at DGIdb | |||
Expression of ZKSCAN3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | ZKSCAN3 | 80317 | 211773_s_at | 0.0847 | 0.8299 | |
| GSE20347 | ZKSCAN3 | 80317 | 211773_s_at | -0.0987 | 0.2305 | |
| GSE23400 | ZKSCAN3 | 80317 | 211773_s_at | -0.0552 | 0.1797 | |
| GSE26886 | ZKSCAN3 | 80317 | 211773_s_at | -0.2963 | 0.0475 | |
| GSE29001 | ZKSCAN3 | 80317 | 211773_s_at | -0.0690 | 0.6430 | |
| GSE38129 | ZKSCAN3 | 80317 | 211773_s_at | -0.2131 | 0.0299 | |
| GSE45670 | ZKSCAN3 | 80317 | 211773_s_at | 0.1292 | 0.2730 | |
| GSE53622 | ZKSCAN3 | 80317 | 6265 | -0.0062 | 0.9466 | |
| GSE53624 | ZKSCAN3 | 80317 | 6265 | 1.4353 | 0.0000 | |
| GSE63941 | ZKSCAN3 | 80317 | 211773_s_at | 0.2544 | 0.3409 | |
| GSE77861 | ZKSCAN3 | 80317 | 211773_s_at | 0.0461 | 0.7216 | |
| GSE97050 | ZKSCAN3 | 80317 | A_23_P168019 | 0.1460 | 0.7414 | |
| SRP007169 | ZKSCAN3 | 80317 | RNAseq | -0.4448 | 0.3840 | |
| SRP064894 | ZKSCAN3 | 80317 | RNAseq | 0.1928 | 0.2346 | |
| SRP133303 | ZKSCAN3 | 80317 | RNAseq | -0.0118 | 0.9422 | |
| SRP159526 | ZKSCAN3 | 80317 | RNAseq | -0.0448 | 0.8740 | |
| SRP193095 | ZKSCAN3 | 80317 | RNAseq | -0.0852 | 0.4729 | |
| SRP219564 | ZKSCAN3 | 80317 | RNAseq | 0.1028 | 0.7266 | |
| TCGA | ZKSCAN3 | 80317 | RNAseq | -0.4844 | 0.0000 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by ZKSCAN3 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of ZKSCAN3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | ZKSCAN3 | 80317 | 3 | 2 | 25 | |
| GSE20123 | ZKSCAN3 | 80317 | 3 | 2 | 25 | |
| GSE43470 | ZKSCAN3 | 80317 | 5 | 0 | 38 | |
| GSE46452 | ZKSCAN3 | 80317 | 1 | 10 | 48 | |
| GSE47630 | ZKSCAN3 | 80317 | 7 | 4 | 29 | |
| GSE54993 | ZKSCAN3 | 80317 | 2 | 1 | 67 | |
| GSE54994 | ZKSCAN3 | 80317 | 11 | 4 | 38 | |
| GSE60625 | ZKSCAN3 | 80317 | 0 | 1 | 10 | |
| GSE74703 | ZKSCAN3 | 80317 | 5 | 0 | 31 | |
| GSE74704 | ZKSCAN3 | 80317 | 0 | 1 | 19 | |
| TCGA | ZKSCAN3 | 80317 | 15 | 19 | 62 |
Total number of gains: 52; Total number of losses: 44; Total Number of normals: 392.
Somatic mutations of ZKSCAN3:
Generating mutation plots.
Highly correlated genes for ZKSCAN3:
Showing top 20/118 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| ZKSCAN3 | SPP2 | 0.698088 | 3 | 0 | 3 |
| ZKSCAN3 | FASLG | 0.634323 | 4 | 0 | 3 |
| ZKSCAN3 | TMEM26 | 0.630062 | 3 | 0 | 3 |
| ZKSCAN3 | GFM1 | 0.627924 | 3 | 0 | 3 |
| ZKSCAN3 | ITIH2 | 0.624407 | 5 | 0 | 5 |
| ZKSCAN3 | FNDC1 | 0.622403 | 3 | 0 | 3 |
| ZKSCAN3 | CSH1 | 0.618058 | 3 | 0 | 3 |
| ZKSCAN3 | NEUROD1 | 0.598228 | 3 | 0 | 3 |
| ZKSCAN3 | AMBN | 0.587423 | 4 | 0 | 4 |
| ZKSCAN3 | NOS1 | 0.587315 | 5 | 0 | 5 |
| ZKSCAN3 | TAAR5 | 0.585696 | 4 | 0 | 4 |
| ZKSCAN3 | CACNA1F | 0.583637 | 4 | 0 | 4 |
| ZKSCAN3 | GP5 | 0.582066 | 3 | 0 | 3 |
| ZKSCAN3 | MC2R | 0.580702 | 5 | 0 | 4 |
| ZKSCAN3 | CRH | 0.579319 | 3 | 0 | 3 |
| ZKSCAN3 | GRM7 | 0.577553 | 3 | 0 | 3 |
| ZKSCAN3 | NEUROD6 | 0.575993 | 4 | 0 | 3 |
| ZKSCAN3 | MYL1 | 0.574869 | 4 | 0 | 3 |
| ZKSCAN3 | RALYL | 0.574302 | 4 | 0 | 3 |
| ZKSCAN3 | AOC2 | 0.571529 | 4 | 0 | 3 |
For details and further investigation, click here
