ZNF557

 

Full name: zinc finger protein 557 Alias Symbol: MGC4054
Type: protein-coding gene Cytoband: 19p13.2
Entrez ID: 79230 HGNC ID: HGNC:28632 Ensembl Gene: ENSG00000130544 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of ZNF557:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZNF557 79230 220444_at 0.4577 0.4456
GSE20347 ZNF557 79230 220444_at 0.0406 0.8288
GSE23400 ZNF557 79230 220444_at 0.0215 0.5681
GSE26886 ZNF557 79230 220444_at -0.4976 0.1656
GSE29001 ZNF557 79230 220444_at -0.0099 0.9836
GSE38129 ZNF557 79230 220444_at 0.1246 0.3884
GSE45670 ZNF557 79230 220444_at 0.6770 0.0010
GSE53622 ZNF557 79230 65572 -0.3115 0.0020
GSE53624 ZNF557 79230 65572 0.0416 0.6541
GSE63941 ZNF557 79230 220444_at -0.5729 0.3834
GSE77861 ZNF557 79230 220444_at 0.0484 0.8090
GSE97050 ZNF557 79230 A_32_P177097 -0.0545 0.8149
SRP007169 ZNF557 79230 RNAseq 0.6908 0.0655
SRP008496 ZNF557 79230 RNAseq 0.7143 0.0058
SRP064894 ZNF557 79230 RNAseq 0.2442 0.0857
SRP133303 ZNF557 79230 RNAseq -0.0841 0.5501
SRP159526 ZNF557 79230 RNAseq -0.0758 0.7234
SRP193095 ZNF557 79230 RNAseq -0.0104 0.8771
SRP219564 ZNF557 79230 RNAseq 0.3854 0.1918
TCGA ZNF557 79230 RNAseq -0.1169 0.1365

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by ZNF557 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ZNF557:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZNF557 79230 5 3 22
GSE20123 ZNF557 79230 4 2 24
GSE43470 ZNF557 79230 2 6 35
GSE46452 ZNF557 79230 47 1 11
GSE47630 ZNF557 79230 5 7 28
GSE54993 ZNF557 79230 16 3 51
GSE54994 ZNF557 79230 6 14 33
GSE60625 ZNF557 79230 9 0 2
GSE74703 ZNF557 79230 2 4 30
GSE74704 ZNF557 79230 1 2 17
TCGA ZNF557 79230 8 21 67

Total number of gains: 105; Total number of losses: 63; Total Number of normals: 320.  


 

Somatic mutations of ZNF557:

 

Generating mutation plots.

 

Highly correlated genes for ZNF557:

 

Showing top 20/251 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZNF557MBD40.871929303
ZNF557BLZF10.814509303
ZNF557TRIM560.767409303
ZNF557EIF3M0.761332303
ZNF557CREB10.760956303
ZNF557RPL7L10.757629404
ZNF557CAPRIN10.749941303
ZNF557TRMT61B0.745422303
ZNF557MMS190.742594303
ZNF557KLHL80.739167303
ZNF557STX60.734777303
ZNF557CDC730.726365303
ZNF557SRSF60.720177303
ZNF557KDM5B0.711756404
ZNF557CCDC90B0.711684303
ZNF557ZNF2230.710757404
ZNF557PLEKHB20.710533403
ZNF557AKT1S10.710146303
ZNF557GAR10.707557303
ZNF557ZNF2600.707338403

For details and further investigation, click here