| Full name: zinc finger protein 839 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 14q32.31 | ||
| Entrez ID: 55778 | HGNC ID: HGNC:20345 | Ensembl Gene: ENSG00000022976 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of ZNF839:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | ZNF839 | 55778 | 221709_s_at | -0.0924 | 0.9140 | |
| GSE20347 | ZNF839 | 55778 | 221709_s_at | -0.0247 | 0.8580 | |
| GSE23400 | ZNF839 | 55778 | 219086_at | -0.0588 | 0.1693 | |
| GSE26886 | ZNF839 | 55778 | 221709_s_at | 0.4180 | 0.0092 | |
| GSE29001 | ZNF839 | 55778 | 219086_at | -0.0318 | 0.9233 | |
| GSE38129 | ZNF839 | 55778 | 221709_s_at | -0.0163 | 0.9070 | |
| GSE45670 | ZNF839 | 55778 | 221709_s_at | 0.0955 | 0.4285 | |
| GSE63941 | ZNF839 | 55778 | 221709_s_at | 0.5346 | 0.1751 | |
| GSE77861 | ZNF839 | 55778 | 221709_s_at | -0.1222 | 0.5943 | |
| GSE97050 | ZNF839 | 55778 | A_24_P361158 | -0.3923 | 0.2261 | |
| SRP007169 | ZNF839 | 55778 | RNAseq | 0.4359 | 0.5142 | |
| SRP064894 | ZNF839 | 55778 | RNAseq | 0.4063 | 0.0691 | |
| SRP133303 | ZNF839 | 55778 | RNAseq | 0.0420 | 0.8143 | |
| SRP159526 | ZNF839 | 55778 | RNAseq | 0.3874 | 0.1921 | |
| SRP193095 | ZNF839 | 55778 | RNAseq | 0.1620 | 0.0891 | |
| SRP219564 | ZNF839 | 55778 | RNAseq | 0.2040 | 0.4657 | |
| TCGA | ZNF839 | 55778 | RNAseq | -0.0577 | 0.3666 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by ZNF839 expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of ZNF839:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | ZNF839 | 55778 | 11 | 5 | 14 | |
| GSE20123 | ZNF839 | 55778 | 10 | 4 | 16 | |
| GSE43470 | ZNF839 | 55778 | 7 | 4 | 32 | |
| GSE46452 | ZNF839 | 55778 | 18 | 4 | 37 | |
| GSE47630 | ZNF839 | 55778 | 10 | 9 | 21 | |
| GSE54993 | ZNF839 | 55778 | 3 | 8 | 59 | |
| GSE54994 | ZNF839 | 55778 | 21 | 4 | 28 | |
| GSE60625 | ZNF839 | 55778 | 0 | 2 | 9 | |
| GSE74703 | ZNF839 | 55778 | 6 | 3 | 27 | |
| GSE74704 | ZNF839 | 55778 | 5 | 3 | 12 | |
| TCGA | ZNF839 | 55778 | 32 | 19 | 45 |
Total number of gains: 123; Total number of losses: 65; Total Number of normals: 300.
Somatic mutations of ZNF839:
Generating mutation plots.
Highly correlated genes for ZNF839:
Showing top 20/166 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| ZNF839 | RPS4Y1 | 0.707151 | 3 | 0 | 3 |
| ZNF839 | GDI1 | 0.706869 | 3 | 0 | 3 |
| ZNF839 | DHX37 | 0.700052 | 3 | 0 | 3 |
| ZNF839 | RPL34 | 0.68562 | 3 | 0 | 3 |
| ZNF839 | SZT2 | 0.68509 | 3 | 0 | 3 |
| ZNF839 | IL17A | 0.683731 | 3 | 0 | 3 |
| ZNF839 | ACSBG1 | 0.683591 | 3 | 0 | 3 |
| ZNF839 | NUDT14 | 0.679545 | 4 | 0 | 4 |
| ZNF839 | SETD3 | 0.678309 | 4 | 0 | 3 |
| ZNF839 | TIMM9 | 0.668477 | 4 | 0 | 3 |
| ZNF839 | CPSF6 | 0.666469 | 3 | 0 | 3 |
| ZNF839 | CDK5RAP3 | 0.665907 | 3 | 0 | 3 |
| ZNF839 | REEP5 | 0.664657 | 3 | 0 | 3 |
| ZNF839 | SIVA1 | 0.657925 | 5 | 0 | 4 |
| ZNF839 | ISCA2 | 0.655928 | 4 | 0 | 4 |
| ZNF839 | UBE2O | 0.650544 | 3 | 0 | 3 |
| ZNF839 | COX19 | 0.650338 | 3 | 0 | 3 |
| ZNF839 | LINC01356 | 0.649348 | 3 | 0 | 3 |
| ZNF839 | WDR20 | 0.648873 | 3 | 0 | 3 |
| ZNF839 | PGAP1 | 0.64704 | 4 | 0 | 3 |
For details and further investigation, click here
