ACTB

 

Full name: actin beta Alias Symbol: 
Type: protein-coding gene Cytoband: 7p22.1
Entrez ID: 60 HGNC ID: HGNC:132 Ensembl Gene: ENSG00000075624 OMIM ID: 102630
Drug and gene relationship at DGIdb
Screen Evidence:

 

ACTB involved pathways:

KEGG pathway Description View
hsa04015Rap1 signaling pathway
hsa04210Apoptosis
hsa04390Hippo signaling pathway
hsa04510Focal adhesion
hsa04520Adherens junction
hsa04530Tight junction
hsa04611Platelet activation
hsa04670Leukocyte transendothelial migration
hsa04810Regulation of actin cytoskeleton
hsa04919Thyroid hormone signaling pathway
hsa04921Oxytocin signaling pathway
hsa04971Gastric acid secretion
hsa05100Bacterial invasion of epithelial cells
hsa05110Vibrio cholerae infection
hsa05130Pathogenic Escherichia coli infection
hsa05132Salmonella infection
hsa05205Proteoglycans in cancer

 

Expression of ACTB:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ACTB 60 224594_x_at 0.0390 0.8753
GSE20347 ACTB 60 200801_x_at 0.0584 0.4903
GSE23400 ACTB 60 213867_x_at -0.0521 0.1446
GSE26886 ACTB 60 213867_x_at -1.2040 0.0000
GSE29001 ACTB 60 213867_x_at -0.0926 0.5622
GSE38129 ACTB 60 200801_x_at -0.0240 0.7719
GSE45670 ACTB 60 200801_x_at 0.0020 0.9867
GSE53622 ACTB 60 41051 0.8449 0.0000
GSE53624 ACTB 60 41051 0.4281 0.0000
GSE63941 ACTB 60 200801_x_at 0.1479 0.6790
GSE77861 ACTB 60 200801_x_at 0.0209 0.8429
GSE97050 ACTB 60 A_23_P135769 -0.0478 0.8190
SRP007169 ACTB 60 RNAseq -1.1081 0.0090
SRP008496 ACTB 60 RNAseq -0.8458 0.0041
SRP064894 ACTB 60 RNAseq -0.1651 0.4373
SRP133303 ACTB 60 RNAseq 0.2055 0.1574
SRP159526 ACTB 60 RNAseq -0.3149 0.3283
SRP193095 ACTB 60 RNAseq -0.0269 0.8535
SRP219564 ACTB 60 RNAseq -0.2356 0.5753
TCGA ACTB 60 RNAseq 0.0504 0.1411

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by ACTB expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ACTB:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ACTB 60 14 1 15
GSE20123 ACTB 60 14 1 15
GSE43470 ACTB 60 6 1 36
GSE46452 ACTB 60 13 1 45
GSE47630 ACTB 60 9 1 30
GSE54993 ACTB 60 0 6 64
GSE54994 ACTB 60 22 1 30
GSE60625 ACTB 60 0 0 11
GSE74703 ACTB 60 6 0 30
GSE74704 ACTB 60 9 0 11
TCGA ACTB 60 56 5 35

Total number of gains: 149; Total number of losses: 17; Total Number of normals: 322.  


 

Somatic mutations of ACTB:

 

Generating mutation plots.

 

Highly correlated genes for ACTB:

 

Showing top 20/162 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ACTBRBM50.712713303
ACTBJOSD20.711793303
ACTBCTF10.711371303
ACTBUBAP10.705289303
ACTBTPD52L20.703143303
ACTBAPEH0.700433303
ACTBCLIP30.699551303
ACTBAKT1S10.696395303
ACTBTMEM150A0.689713303
ACTBNR4A20.687264303
ACTBPORCN0.680006303
ACTBSNX170.678117303
ACTBPOTEF0.662626404
ACTBXRRA10.655513303
ACTBDNAH110.648715303
ACTBRND30.641479403
ACTBLATS20.640917403
ACTBRHOG0.638403403
ACTBANO80.636194303
ACTBDDR20.633962403

For details and further investigation, click here