LATS2

 

Full name: large tumor suppressor kinase 2 Alias Symbol: 
Type: protein-coding gene Cytoband: 13q12.11
Entrez ID: 26524 HGNC ID: HGNC:6515 Ensembl Gene: ENSG00000150457 OMIM ID: 604861
Drug and gene relationship at DGIdb
Screen Evidence:
  • This gene has been idenfitied as a common driver in this paper.
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

LATS2 involved pathways:

KEGG pathway Description View
hsa04390Hippo signaling pathway

 

Expression of LATS2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LATS2 26524 227013_at -0.6190 0.2775
GSE26886 LATS2 26524 227013_at -0.6495 0.0154
GSE45670 LATS2 26524 227013_at -0.8016 0.0000
GSE53622 LATS2 26524 44500 -0.4197 0.0000
GSE53624 LATS2 26524 44500 -0.5835 0.0000
GSE63941 LATS2 26524 223380_s_at -1.5215 0.0092
GSE77861 LATS2 26524 227013_at -0.5512 0.1566
GSE97050 LATS2 26524 A_24_P70002 -0.6118 0.1387
SRP007169 LATS2 26524 RNAseq -1.4243 0.0011
SRP008496 LATS2 26524 RNAseq -0.8079 0.0068
SRP064894 LATS2 26524 RNAseq -0.5680 0.0520
SRP133303 LATS2 26524 RNAseq -0.3575 0.1073
SRP159526 LATS2 26524 RNAseq -0.7211 0.0154
SRP193095 LATS2 26524 RNAseq -0.5310 0.0106
SRP219564 LATS2 26524 RNAseq -0.4958 0.2683
TCGA LATS2 26524 RNAseq -0.2455 0.0002

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by LATS2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of LATS2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LATS2 26524 1 15 14
GSE20123 LATS2 26524 1 14 15
GSE43470 LATS2 26524 2 13 28
GSE46452 LATS2 26524 0 33 26
GSE47630 LATS2 26524 3 26 11
GSE54993 LATS2 26524 11 2 57
GSE54994 LATS2 26524 1 13 39
GSE60625 LATS2 26524 0 3 8
GSE74703 LATS2 26524 2 10 24
GSE74704 LATS2 26524 0 12 8
TCGA LATS2 26524 6 43 47

Total number of gains: 27; Total number of losses: 184; Total Number of normals: 277.  


 

Somatic mutations of LATS2:

 

Generating mutation plots.

 

Highly correlated genes for LATS2:

 

Showing top 20/897 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LATS2DPH30.767942303
LATS2MYO9A0.747115404
LATS2ALDH1A20.729152404
LATS2CLCC10.72659403
LATS2ZC3H130.725545303
LATS2ILK0.721874605
LATS2USP9X0.716756303
LATS2KLHL290.710393303
LATS2CACNA1C0.70897505
LATS2OR7A100.708731303
LATS2SST0.705588303
LATS2SOX170.704277404
LATS2ARHGAP310.70362505
LATS2PRICKLE20.70257707
LATS2COX7A10.70218606
LATS2LRCH10.69997404
LATS2USP120.696984403
LATS2SGCA0.695079505
LATS2MAGI10.693193404
LATS2FIBIN0.692894504

For details and further investigation, click here