ADAMTS6

 

Full name: ADAM metallopeptidase with thrombospondin type 1 motif 6 Alias Symbol: ADAM-TS6
Type: protein-coding gene Cytoband: 5q12.3
Entrez ID: 11174 HGNC ID: HGNC:222 Ensembl Gene: ENSG00000049192 OMIM ID: 605008
Drug and gene relationship at DGIdb

 

Expression of ADAMTS6:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ADAMTS6 11174 237411_at 0.3248 0.2467
GSE20347 ADAMTS6 11174 220866_at 0.0216 0.7866
GSE23400 ADAMTS6 11174 220866_at -0.0503 0.1742
GSE26886 ADAMTS6 11174 1570351_at 0.0996 0.3282
GSE29001 ADAMTS6 11174 220866_at -0.0359 0.8156
GSE38129 ADAMTS6 11174 220866_at -0.0548 0.4661
GSE45670 ADAMTS6 11174 237411_at 0.1481 0.6995
GSE53622 ADAMTS6 11174 92179 0.7961 0.0000
GSE53624 ADAMTS6 11174 4203 1.3351 0.0000
GSE63941 ADAMTS6 11174 237411_at -2.6779 0.0009
GSE77861 ADAMTS6 11174 1570351_at 0.0196 0.8520
GSE97050 ADAMTS6 11174 A_33_P3286953 0.4990 0.1453
SRP007169 ADAMTS6 11174 RNAseq 3.0093 0.0014
SRP064894 ADAMTS6 11174 RNAseq 1.9241 0.0000
SRP133303 ADAMTS6 11174 RNAseq 1.4614 0.0000
SRP159526 ADAMTS6 11174 RNAseq 0.5598 0.3792
SRP193095 ADAMTS6 11174 RNAseq 1.7699 0.0000
SRP219564 ADAMTS6 11174 RNAseq 0.7986 0.0449
TCGA ADAMTS6 11174 RNAseq 0.1888 0.4024

Upregulated datasets: 5; Downregulated datasets: 1.  


 

Survival by ADAMTS6 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ADAMTS6:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ADAMTS6 11174 0 13 17
GSE20123 ADAMTS6 11174 0 13 17
GSE43470 ADAMTS6 11174 1 13 29
GSE46452 ADAMTS6 11174 0 28 31
GSE47630 ADAMTS6 11174 2 17 21
GSE54993 ADAMTS6 11174 8 1 61
GSE54994 ADAMTS6 11174 1 19 33
GSE60625 ADAMTS6 11174 0 0 11
GSE74703 ADAMTS6 11174 1 9 26
GSE74704 ADAMTS6 11174 0 6 14
TCGA ADAMTS6 11174 4 50 42

Total number of gains: 17; Total number of losses: 169; Total Number of normals: 302.  


 

Somatic mutations of ADAMTS6:

 

Generating mutation plots.

 

Highly correlated genes for ADAMTS6:

 

Showing top 20/371 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ADAMTS6RNF170.731778505
ADAMTS6L3MBTL10.717342403
ADAMTS6LCT0.711444505
ADAMTS6P4HA30.709726706
ADAMTS6TRPM30.707396505
ADAMTS6SPOCD10.705558504
ADAMTS6CSGALNACT20.702122505
ADAMTS6OR1F10.702043505
ADAMTS6ZDHHC180.69841303
ADAMTS6KIR3DL30.693684606
ADAMTS6RIMS40.692585303
ADAMTS6MBL20.68968303
ADAMTS6CHSY30.688897605
ADAMTS6IFNA40.683138505
ADAMTS6P4HA20.681002303
ADAMTS6COL1A20.679332403
ADAMTS6RFX80.677097303
ADAMTS6ADAMTS120.67689908
ADAMTS6SALL40.674104404
ADAMTS6FOXN3-AS20.673791505

For details and further investigation, click here