| Full name: spalt like transcription factor 4 | Alias Symbol: dJ1112F19.1|ZNF797 | ||
| Type: protein-coding gene | Cytoband: 20q13.2 | ||
| Entrez ID: 57167 | HGNC ID: HGNC:15924 | Ensembl Gene: ENSG00000101115 | OMIM ID: 607343 |
| Drug and gene relationship at DGIdb | |||
Expression of SALL4:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SALL4 | 57167 | 229661_at | 0.8142 | 0.0676 | |
| GSE26886 | SALL4 | 57167 | 229661_at | 0.4422 | 0.0008 | |
| GSE45670 | SALL4 | 57167 | 229661_at | 0.5570 | 0.0006 | |
| GSE53622 | SALL4 | 57167 | 107626 | 1.7665 | 0.0000 | |
| GSE53624 | SALL4 | 57167 | 107626 | 2.4928 | 0.0000 | |
| GSE63941 | SALL4 | 57167 | 229661_at | 1.1847 | 0.1198 | |
| GSE77861 | SALL4 | 57167 | 229661_at | 0.3447 | 0.0889 | |
| GSE97050 | SALL4 | 57167 | A_23_P109072 | 0.5410 | 0.1733 | |
| SRP007169 | SALL4 | 57167 | RNAseq | 4.3308 | 0.0029 | |
| SRP064894 | SALL4 | 57167 | RNAseq | 2.5685 | 0.0000 | |
| SRP133303 | SALL4 | 57167 | RNAseq | 2.1387 | 0.0000 | |
| SRP159526 | SALL4 | 57167 | RNAseq | 3.5662 | 0.0000 | |
| SRP219564 | SALL4 | 57167 | RNAseq | 3.2557 | 0.0000 | |
| TCGA | SALL4 | 57167 | RNAseq | 2.3978 | 0.0000 |
Upregulated datasets: 8; Downregulated datasets: 0.
Survival by SALL4 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SALL4:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SALL4 | 57167 | 16 | 2 | 12 | |
| GSE20123 | SALL4 | 57167 | 16 | 2 | 12 | |
| GSE43470 | SALL4 | 57167 | 13 | 0 | 30 | |
| GSE46452 | SALL4 | 57167 | 29 | 0 | 30 | |
| GSE47630 | SALL4 | 57167 | 24 | 1 | 15 | |
| GSE54993 | SALL4 | 57167 | 0 | 17 | 53 | |
| GSE54994 | SALL4 | 57167 | 27 | 0 | 26 | |
| GSE60625 | SALL4 | 57167 | 0 | 0 | 11 | |
| GSE74703 | SALL4 | 57167 | 10 | 0 | 26 | |
| GSE74704 | SALL4 | 57167 | 12 | 0 | 8 | |
| TCGA | SALL4 | 57167 | 45 | 3 | 48 |
Total number of gains: 192; Total number of losses: 25; Total Number of normals: 271.
Somatic mutations of SALL4:
Generating mutation plots.
Highly correlated genes for SALL4:
Showing top 20/713 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SALL4 | GPRIN1 | 0.779995 | 6 | 0 | 6 |
| SALL4 | DNMT3B | 0.776536 | 7 | 0 | 7 |
| SALL4 | PTK7 | 0.774615 | 6 | 0 | 6 |
| SALL4 | KIF19 | 0.756175 | 3 | 0 | 3 |
| SALL4 | C2orf81 | 0.755607 | 3 | 0 | 3 |
| SALL4 | HOXD10 | 0.746271 | 8 | 0 | 8 |
| SALL4 | COL27A1 | 0.736133 | 7 | 0 | 7 |
| SALL4 | HOXD11 | 0.733976 | 7 | 0 | 7 |
| SALL4 | INHBA | 0.733837 | 6 | 0 | 6 |
| SALL4 | LOXL2 | 0.732712 | 6 | 0 | 6 |
| SALL4 | B4GALNT1 | 0.732252 | 4 | 0 | 4 |
| SALL4 | MMP1 | 0.72924 | 6 | 0 | 6 |
| SALL4 | RUNX1-IT1 | 0.721216 | 4 | 0 | 4 |
| SALL4 | RFX8 | 0.720425 | 3 | 0 | 3 |
| SALL4 | PLAU | 0.720167 | 6 | 0 | 6 |
| SALL4 | MMP11 | 0.718433 | 6 | 0 | 5 |
| SALL4 | MFAP2 | 0.718356 | 7 | 0 | 6 |
| SALL4 | COL5A1 | 0.714495 | 7 | 0 | 5 |
| SALL4 | COL10A1 | 0.713837 | 7 | 0 | 6 |
| SALL4 | NPM2 | 0.713764 | 4 | 0 | 4 |
For details and further investigation, click here
