ALDH1A3

 

Full name: aldehyde dehydrogenase 1 family member A3 Alias Symbol: RALDH3
Type: protein-coding gene Cytoband: 15q26.3
Entrez ID: 220 HGNC ID: HGNC:409 Ensembl Gene: ENSG00000184254 OMIM ID: 600463
Drug and gene relationship at DGIdb

 

Expression of ALDH1A3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ALDH1A3 220 203180_at -0.1842 0.8905
GSE20347 ALDH1A3 220 203180_at -1.0663 0.0141
GSE23400 ALDH1A3 220 203180_at -0.8763 0.0000
GSE26886 ALDH1A3 220 203180_at -2.6360 0.0000
GSE29001 ALDH1A3 220 203180_at -1.2952 0.0039
GSE38129 ALDH1A3 220 203180_at -0.8514 0.0073
GSE45670 ALDH1A3 220 203180_at 0.7059 0.1664
GSE53622 ALDH1A3 220 25480 -0.7104 0.0000
GSE53624 ALDH1A3 220 25480 -1.1959 0.0000
GSE63941 ALDH1A3 220 203180_at -0.8517 0.6604
GSE77861 ALDH1A3 220 203180_at -0.3253 0.4392
GSE97050 ALDH1A3 220 A_23_P205959 0.1492 0.8565
SRP007169 ALDH1A3 220 RNAseq -2.5088 0.0011
SRP008496 ALDH1A3 220 RNAseq -2.7702 0.0000
SRP064894 ALDH1A3 220 RNAseq -1.1987 0.0002
SRP133303 ALDH1A3 220 RNAseq -0.1868 0.5886
SRP159526 ALDH1A3 220 RNAseq -0.9659 0.0177
SRP193095 ALDH1A3 220 RNAseq -0.8539 0.0222
SRP219564 ALDH1A3 220 RNAseq -0.6237 0.2793
TCGA ALDH1A3 220 RNAseq 0.0266 0.8369

Upregulated datasets: 0; Downregulated datasets: 7.  


 

Survival by ALDH1A3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ALDH1A3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ALDH1A3 220 7 2 21
GSE20123 ALDH1A3 220 7 2 21
GSE43470 ALDH1A3 220 6 5 32
GSE46452 ALDH1A3 220 3 7 49
GSE47630 ALDH1A3 220 9 10 21
GSE54993 ALDH1A3 220 4 7 59
GSE54994 ALDH1A3 220 8 7 38
GSE60625 ALDH1A3 220 4 0 7
GSE74703 ALDH1A3 220 5 4 27
GSE74704 ALDH1A3 220 3 3 14
TCGA ALDH1A3 220 18 12 66

Total number of gains: 74; Total number of losses: 59; Total Number of normals: 355.  


 

Somatic mutations of ALDH1A3:

 

Generating mutation plots.

 

Highly correlated genes for ALDH1A3:

 

Showing top 20/667 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ALDH1A3TMEM41B0.74237303
ALDH1A3PLCD30.723382303
ALDH1A3LRRC400.722781303
ALDH1A3DUSP180.721568303
ALDH1A3GLCE0.715251505
ALDH1A3MCC0.710865303
ALDH1A3ADAM100.710302303
ALDH1A3GLUD20.706405504
ALDH1A3ZFC3H10.704997303
ALDH1A3STX40.700036303
ALDH1A3PLEKHA70.69892404
ALDH1A3FBXO80.698655303
ALDH1A3ABHD120.69768303
ALDH1A3ZNHIT60.686841303
ALDH1A3KCNJ20.685594303
ALDH1A3FNTA0.685434303
ALDH1A3ALDOC0.683909403
ALDH1A3PXMP20.682264403
ALDH1A3REEP30.682121504
ALDH1A3MRPL350.678354303

For details and further investigation, click here