AMER2

 

Full name: APC membrane recruitment protein 2 Alias Symbol: FLJ25477
Type: protein-coding gene Cytoband: 13q12.13
Entrez ID: 219287 HGNC ID: HGNC:26360 Ensembl Gene: ENSG00000165566 OMIM ID: 614659

 

Expression of AMER2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 AMER2 219287 1553720_a_at -0.3129 0.1535
GSE26886 AMER2 219287 1553720_a_at -0.3614 0.0082
GSE45670 AMER2 219287 1553720_a_at 0.0375 0.7982
GSE53622 AMER2 219287 28389 0.0871 0.5788
GSE53624 AMER2 219287 28389 0.6715 0.0000
GSE63941 AMER2 219287 1553720_a_at 0.1446 0.4426
GSE77861 AMER2 219287 1553720_a_at -0.3849 0.0057
SRP133303 AMER2 219287 RNAseq 0.1126 0.5410
SRP193095 AMER2 219287 RNAseq -0.2068 0.2575
SRP219564 AMER2 219287 RNAseq 0.4377 0.3060

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by AMER2 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  


Copy number change of AMER2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 AMER2 219287 1 12 17
GSE20123 AMER2 219287 1 11 18
GSE43470 AMER2 219287 2 12 29
GSE46452 AMER2 219287 0 33 26
GSE47630 AMER2 219287 3 26 11
GSE54993 AMER2 219287 11 2 57
GSE54994 AMER2 219287 1 13 39
GSE60625 AMER2 219287 0 3 8
GSE74703 AMER2 219287 2 9 25
GSE74704 AMER2 219287 0 9 11
TCGA AMER2 219287 5 46 45

Total number of gains: 26; Total number of losses: 176; Total Number of normals: 286.  


 

Somatic mutations of AMER2:

 

Generating mutation plots.

 

Highly correlated genes for AMER2:

 

Showing top 20/286 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
AMER2KRT33A0.780489303
AMER2LMAN20.744326303
AMER2BBOX10.740747303
AMER2MUC170.733691303
AMER2SMPD20.732816303
AMER2TP53I30.730149303
AMER2RNH10.726083303
AMER2HTR3B0.723315303
AMER2QSOX10.71934303
AMER2LINC003150.708969303
AMER2CNPPD10.704626303
AMER2GLI40.701454404
AMER2GALR30.700205303
AMER2CRABP20.699475403
AMER2CYP3A430.698214303
AMER2GAB20.698158303
AMER2SH3GL10.697811303
AMER2PHYHD10.69778303
AMER2PRDX50.694972303
AMER2CXCR20.692834403

For details and further investigation, click here