| Full name: bladder cancer associated transcript 1 | Alias Symbol: linc-UBC1|LINC00912|onco-lncRNA-30 | ||
| Type: non-coding RNA | Cytoband: 1q32.1 | ||
| Entrez ID: 101669762 | HGNC ID: HGNC:48597 | Ensembl Gene: ENSG00000281406 | OMIM ID: 615480 |
Expression of BLACAT1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | BLACAT1 | 101669762 | 232105_at | 0.5039 | 0.5789 | |
| GSE26886 | BLACAT1 | 101669762 | 232105_at | 1.3215 | 0.0002 | |
| GSE45670 | BLACAT1 | 101669762 | 232105_at | 0.9820 | 0.0104 | |
| GSE63941 | BLACAT1 | 101669762 | 232105_at | 1.9645 | 0.0697 | |
| GSE77861 | BLACAT1 | 101669762 | 232105_at | 0.8954 | 0.0285 | |
| SRP007169 | BLACAT1 | 101669762 | RNAseq | 0.6752 | 0.3445 | |
| SRP133303 | BLACAT1 | 101669762 | RNAseq | 1.0887 | 0.0002 | |
| SRP159526 | BLACAT1 | 101669762 | RNAseq | 1.2919 | 0.0053 | |
| SRP219564 | BLACAT1 | 101669762 | RNAseq | 1.9799 | 0.0610 |
Upregulated datasets: 3; Downregulated datasets: 0.
Copy number change of BLACAT1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | BLACAT1 | 101669762 | 11 | 0 | 19 | |
| GSE20123 | BLACAT1 | 101669762 | 11 | 0 | 19 | |
| GSE43470 | BLACAT1 | 101669762 | 7 | 0 | 36 | |
| GSE46452 | BLACAT1 | 101669762 | 3 | 1 | 55 | |
| GSE47630 | BLACAT1 | 101669762 | 14 | 0 | 26 | |
| GSE54993 | BLACAT1 | 101669762 | 0 | 6 | 64 | |
| GSE54994 | BLACAT1 | 101669762 | 15 | 0 | 38 | |
| GSE60625 | BLACAT1 | 101669762 | 0 | 0 | 11 | |
| GSE74703 | BLACAT1 | 101669762 | 7 | 0 | 29 | |
| GSE74704 | BLACAT1 | 101669762 | 5 | 0 | 15 |
Total number of gains: 73; Total number of losses: 7; Total Number of normals: 312.
Somatic mutations of BLACAT1:
Generating mutation plots.
Highly correlated genes for BLACAT1:
Showing top 20/584 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| BLACAT1 | TENM2 | 0.781312 | 4 | 0 | 4 |
| BLACAT1 | SLC38A10 | 0.766019 | 3 | 0 | 3 |
| BLACAT1 | RBP1 | 0.757035 | 4 | 0 | 4 |
| BLACAT1 | YEATS2 | 0.747097 | 3 | 0 | 3 |
| BLACAT1 | HSD17B1 | 0.739459 | 3 | 0 | 3 |
| BLACAT1 | IL36G | 0.738472 | 3 | 0 | 3 |
| BLACAT1 | POP7 | 0.734655 | 3 | 0 | 3 |
| BLACAT1 | SLC3A2 | 0.734413 | 3 | 0 | 3 |
| BLACAT1 | DCBLD1 | 0.732624 | 4 | 0 | 4 |
| BLACAT1 | BRCA1 | 0.732325 | 4 | 0 | 4 |
| BLACAT1 | ADAM17 | 0.731719 | 4 | 0 | 4 |
| BLACAT1 | XPR1 | 0.729296 | 4 | 0 | 4 |
| BLACAT1 | HS1BP3 | 0.728336 | 3 | 0 | 3 |
| BLACAT1 | HAS3 | 0.7283 | 3 | 0 | 3 |
| BLACAT1 | CUX1 | 0.72792 | 3 | 0 | 3 |
| BLACAT1 | NMT1 | 0.727891 | 4 | 0 | 4 |
| BLACAT1 | SPRR2G | 0.726763 | 3 | 0 | 3 |
| BLACAT1 | POPDC3 | 0.715407 | 4 | 0 | 4 |
| BLACAT1 | TCF3 | 0.713549 | 3 | 0 | 3 |
| BLACAT1 | MB21D2 | 0.712455 | 4 | 0 | 4 |
For details and further investigation, click here
