| Full name: chromosome 15 open reading frame 40 | Alias Symbol: MGC29937 | ||
| Type: protein-coding gene | Cytoband: 15q25.2 | ||
| Entrez ID: 123207 | HGNC ID: HGNC:28443 | Ensembl Gene: ENSG00000169609 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of C15orf40:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | C15orf40 | 123207 | 1552310_at | -0.2168 | 0.6549 | |
| GSE26886 | C15orf40 | 123207 | 1552310_at | 0.4598 | 0.1646 | |
| GSE45670 | C15orf40 | 123207 | 1552310_at | -0.1195 | 0.4462 | |
| GSE53622 | C15orf40 | 123207 | 20691 | 0.8467 | 0.0000 | |
| GSE53624 | C15orf40 | 123207 | 20691 | 0.4853 | 0.0000 | |
| GSE63941 | C15orf40 | 123207 | 1552310_at | -0.1996 | 0.6483 | |
| GSE77861 | C15orf40 | 123207 | 1552310_at | 0.2900 | 0.3710 | |
| GSE97050 | C15orf40 | 123207 | A_32_P99902 | -0.0795 | 0.7177 | |
| SRP007169 | C15orf40 | 123207 | RNAseq | -0.8614 | 0.0211 | |
| SRP008496 | C15orf40 | 123207 | RNAseq | -0.8114 | 0.0074 | |
| SRP064894 | C15orf40 | 123207 | RNAseq | -0.0603 | 0.7244 | |
| SRP133303 | C15orf40 | 123207 | RNAseq | 0.0018 | 0.9893 | |
| SRP159526 | C15orf40 | 123207 | RNAseq | 1.0035 | 0.0029 | |
| SRP193095 | C15orf40 | 123207 | RNAseq | 0.0933 | 0.3275 | |
| SRP219564 | C15orf40 | 123207 | RNAseq | -0.1111 | 0.7215 | |
| TCGA | C15orf40 | 123207 | RNAseq | -0.0111 | 0.8624 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by C15orf40 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of C15orf40:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C15orf40 | 123207 | 7 | 1 | 22 | |
| GSE20123 | C15orf40 | 123207 | 7 | 1 | 22 | |
| GSE43470 | C15orf40 | 123207 | 4 | 4 | 35 | |
| GSE46452 | C15orf40 | 123207 | 3 | 7 | 49 | |
| GSE47630 | C15orf40 | 123207 | 8 | 10 | 22 | |
| GSE54993 | C15orf40 | 123207 | 5 | 6 | 59 | |
| GSE54994 | C15orf40 | 123207 | 5 | 7 | 41 | |
| GSE60625 | C15orf40 | 123207 | 4 | 0 | 7 | |
| GSE74703 | C15orf40 | 123207 | 4 | 2 | 30 | |
| GSE74704 | C15orf40 | 123207 | 3 | 1 | 16 | |
| TCGA | C15orf40 | 123207 | 15 | 14 | 67 |
Total number of gains: 65; Total number of losses: 53; Total Number of normals: 370.
Somatic mutations of C15orf40:
Generating mutation plots.
Highly correlated genes for C15orf40:
Showing top 20/49 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C15orf40 | DHRS7B | 0.759998 | 3 | 0 | 3 |
| C15orf40 | ZDHHC20 | 0.750731 | 4 | 0 | 4 |
| C15orf40 | MC1R | 0.716792 | 3 | 0 | 3 |
| C15orf40 | TBC1D10B | 0.711595 | 3 | 0 | 3 |
| C15orf40 | MS4A18 | 0.687359 | 3 | 0 | 3 |
| C15orf40 | NPBWR1 | 0.681829 | 3 | 0 | 3 |
| C15orf40 | LRRC57 | 0.679618 | 3 | 0 | 3 |
| C15orf40 | KANK3 | 0.6701 | 4 | 0 | 3 |
| C15orf40 | RPS17 | 0.665085 | 4 | 0 | 3 |
| C15orf40 | SMPD4 | 0.664941 | 3 | 0 | 3 |
| C15orf40 | HAGHL | 0.660381 | 3 | 0 | 3 |
| C15orf40 | TMEM87A | 0.659355 | 3 | 0 | 3 |
| C15orf40 | RAPGEF5 | 0.655643 | 4 | 0 | 4 |
| C15orf40 | MPLKIP | 0.640444 | 3 | 0 | 3 |
| C15orf40 | GPR32 | 0.640008 | 3 | 0 | 3 |
| C15orf40 | YEATS4 | 0.639742 | 4 | 0 | 3 |
| C15orf40 | SLCO1A2 | 0.635293 | 4 | 0 | 3 |
| C15orf40 | DNAH10 | 0.63473 | 3 | 0 | 3 |
| C15orf40 | HMBS | 0.632222 | 4 | 0 | 3 |
| C15orf40 | NPM2 | 0.623947 | 3 | 0 | 3 |
For details and further investigation, click here
