C16orf58

 

Full name: chromosome 16 open reading frame 58 Alias Symbol: FLJ13868
Type: protein-coding gene Cytoband: 16p11.2
Entrez ID: 64755 HGNC ID: HGNC:25848 Ensembl Gene: ENSG00000140688 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of C16orf58:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C16orf58 64755 217891_at 0.1427 0.7634
GSE20347 C16orf58 64755 217891_at 0.0411 0.7795
GSE23400 C16orf58 64755 222190_s_at 0.0859 0.0327
GSE26886 C16orf58 64755 222190_s_at 0.2494 0.0632
GSE29001 C16orf58 64755 222190_s_at 0.0716 0.6317
GSE38129 C16orf58 64755 217891_at 0.0888 0.4098
GSE45670 C16orf58 64755 222190_s_at 0.1691 0.0299
GSE53622 C16orf58 64755 137052 0.2899 0.0000
GSE53624 C16orf58 64755 137052 0.3058 0.0000
GSE63941 C16orf58 64755 222190_s_at 0.2687 0.3064
GSE77861 C16orf58 64755 222190_s_at -0.0425 0.8137
GSE97050 C16orf58 64755 A_23_P54891 0.2115 0.4193
SRP007169 C16orf58 64755 RNAseq -0.4152 0.2751
SRP008496 C16orf58 64755 RNAseq -0.2411 0.2875
SRP064894 C16orf58 64755 RNAseq 0.0573 0.7570
SRP133303 C16orf58 64755 RNAseq 0.2075 0.2352
SRP159526 C16orf58 64755 RNAseq 0.2454 0.2921
SRP193095 C16orf58 64755 RNAseq 0.1296 0.2016
SRP219564 C16orf58 64755 RNAseq 0.2566 0.1920
TCGA C16orf58 64755 RNAseq -0.1187 0.0058

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by C16orf58 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of C16orf58:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C16orf58 64755 4 4 22
GSE20123 C16orf58 64755 3 3 24
GSE43470 C16orf58 64755 3 3 37
GSE46452 C16orf58 64755 38 1 20
GSE47630 C16orf58 64755 11 7 22
GSE54993 C16orf58 64755 2 5 63
GSE54994 C16orf58 64755 4 10 39
GSE60625 C16orf58 64755 4 0 7
GSE74703 C16orf58 64755 3 2 31
GSE74704 C16orf58 64755 3 2 15
TCGA C16orf58 64755 20 10 66

Total number of gains: 95; Total number of losses: 47; Total Number of normals: 346.  


 

Somatic mutations of C16orf58:

 

Generating mutation plots.

 

Highly correlated genes for C16orf58:

 

Showing top 20/329 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C16orf58COG80.785338303
C16orf58MRPL380.784682303
C16orf58PSKH10.772609303
C16orf58PI4K2A0.760153303
C16orf58FOXP40.753458303
C16orf58CYTH30.751511303
C16orf58MAST20.751091303
C16orf58WDR770.741139303
C16orf58SUFU0.730663303
C16orf58COMMD50.728258303
C16orf58ACAP10.728216303
C16orf58CD79B0.727599303
C16orf58TAGAP0.72022303
C16orf58GHDC0.719922303
C16orf58DMAP10.715203303
C16orf58ACY10.709656303
C16orf58SON0.709621303
C16orf58AP1B10.70148303
C16orf58C3orf330.700285303
C16orf58ACAD90.699697303

For details and further investigation, click here