| Full name: chromosome 16 open reading frame 90 | Alias Symbol: LOC646174 | ||
| Type: protein-coding gene | Cytoband: 16p13.3 | ||
| Entrez ID: 646174 | HGNC ID: HGNC:34455 | Ensembl Gene: ENSG00000215131 | OMIM ID: |
Expression of C16orf90:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE53622 | C16orf90 | 646174 | 128812 | 0.0226 | 0.7482 | |
| GSE53624 | C16orf90 | 646174 | 128812 | 0.0625 | 0.4206 | |
| GSE97050 | C16orf90 | 646174 | A_33_P3295690 | -0.0878 | 0.6715 | |
| TCGA | C16orf90 | 646174 | RNAseq | 0.9586 | 0.3060 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by C16orf90 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of C16orf90:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C16orf90 | 646174 | 5 | 5 | 20 | |
| GSE20123 | C16orf90 | 646174 | 5 | 4 | 21 | |
| GSE43470 | C16orf90 | 646174 | 4 | 7 | 32 | |
| GSE46452 | C16orf90 | 646174 | 38 | 1 | 20 | |
| GSE47630 | C16orf90 | 646174 | 13 | 6 | 21 | |
| GSE54993 | C16orf90 | 646174 | 4 | 5 | 61 | |
| GSE54994 | C16orf90 | 646174 | 5 | 9 | 39 | |
| GSE60625 | C16orf90 | 646174 | 4 | 0 | 7 | |
| GSE74703 | C16orf90 | 646174 | 4 | 5 | 27 | |
| GSE74704 | C16orf90 | 646174 | 3 | 2 | 15 | |
| TCGA | C16orf90 | 646174 | 19 | 14 | 63 |
Total number of gains: 104; Total number of losses: 58; Total Number of normals: 326.
Somatic mutations of C16orf90:
Generating mutation plots.
Highly correlated genes for C16orf90:
Showing all 18 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C16orf90 | ACRBP | 0.723431 | 3 | 0 | 3 |
| C16orf90 | TMEM63B | 0.703757 | 3 | 0 | 3 |
| C16orf90 | OR1L6 | 0.686601 | 3 | 0 | 3 |
| C16orf90 | CYP26C1 | 0.667473 | 3 | 0 | 3 |
| C16orf90 | IBA57 | 0.663517 | 3 | 0 | 3 |
| C16orf90 | AMH | 0.652104 | 3 | 0 | 3 |
| C16orf90 | IFFO1 | 0.650152 | 3 | 0 | 3 |
| C16orf90 | RIT2 | 0.644784 | 3 | 0 | 3 |
| C16orf90 | SLC11A1 | 0.640853 | 3 | 0 | 3 |
| C16orf90 | FLT4 | 0.630096 | 3 | 0 | 3 |
| C16orf90 | UTF1 | 0.610284 | 3 | 0 | 3 |
| C16orf90 | APOA2 | 0.60936 | 3 | 0 | 3 |
| C16orf90 | KIR3DL2 | 0.607929 | 3 | 0 | 3 |
| C16orf90 | SFTPA2 | 0.606408 | 3 | 0 | 3 |
| C16orf90 | SPSB4 | 0.605617 | 3 | 0 | 3 |
| C16orf90 | SLAMF9 | 0.59567 | 3 | 0 | 3 |
| C16orf90 | NRTN | 0.594452 | 3 | 0 | 3 |
| C16orf90 | IMPDH1 | 0.52544 | 4 | 0 | 3 |
For details and further investigation, click here
