| Full name: sterile alpha motif domain containing 9 | Alias Symbol: KIAA2004|FLJ20073 | ||
| Type: protein-coding gene | Cytoband: 7q21.2 | ||
| Entrez ID: 54809 | HGNC ID: HGNC:1348 | Ensembl Gene: ENSG00000205413 | OMIM ID: 610456 |
| Drug and gene relationship at DGIdb | |||
Expression of SAMD9:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SAMD9 | 54809 | 228531_at | -0.6600 | 0.6758 | |
| GSE20347 | SAMD9 | 54809 | 219691_at | -2.0211 | 0.0000 | |
| GSE23400 | SAMD9 | 54809 | 219691_at | -1.3641 | 0.0000 | |
| GSE26886 | SAMD9 | 54809 | 228531_at | -2.2399 | 0.0000 | |
| GSE29001 | SAMD9 | 54809 | 219691_at | -0.9394 | 0.1795 | |
| GSE38129 | SAMD9 | 54809 | 219691_at | -1.2868 | 0.0041 | |
| GSE45670 | SAMD9 | 54809 | 228531_at | 0.0288 | 0.9479 | |
| GSE53622 | SAMD9 | 54809 | 64426 | -0.9876 | 0.0000 | |
| GSE53624 | SAMD9 | 54809 | 64426 | -1.3927 | 0.0000 | |
| GSE63941 | SAMD9 | 54809 | 228531_at | -0.5813 | 0.7095 | |
| GSE77861 | SAMD9 | 54809 | 228531_at | -1.5082 | 0.0047 | |
| GSE97050 | SAMD9 | 54809 | A_24_P175187 | -0.0609 | 0.9601 | |
| SRP007169 | SAMD9 | 54809 | RNAseq | -1.9101 | 0.0022 | |
| SRP008496 | SAMD9 | 54809 | RNAseq | -2.0746 | 0.0001 | |
| SRP064894 | SAMD9 | 54809 | RNAseq | -1.4976 | 0.0002 | |
| SRP133303 | SAMD9 | 54809 | RNAseq | -0.5872 | 0.0794 | |
| SRP159526 | SAMD9 | 54809 | RNAseq | -2.6494 | 0.0009 | |
| SRP193095 | SAMD9 | 54809 | RNAseq | -1.2396 | 0.0001 | |
| SRP219564 | SAMD9 | 54809 | RNAseq | -1.8202 | 0.0557 | |
| TCGA | SAMD9 | 54809 | RNAseq | 0.5221 | 0.0001 |
Upregulated datasets: 0; Downregulated datasets: 11.
Survival by SAMD9 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SAMD9:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SAMD9 | 54809 | 13 | 0 | 17 | |
| GSE20123 | SAMD9 | 54809 | 13 | 0 | 17 | |
| GSE43470 | SAMD9 | 54809 | 7 | 1 | 35 | |
| GSE46452 | SAMD9 | 54809 | 11 | 0 | 48 | |
| GSE47630 | SAMD9 | 54809 | 8 | 2 | 30 | |
| GSE54993 | SAMD9 | 54809 | 1 | 8 | 61 | |
| GSE54994 | SAMD9 | 54809 | 16 | 2 | 35 | |
| GSE60625 | SAMD9 | 54809 | 0 | 0 | 11 | |
| GSE74703 | SAMD9 | 54809 | 6 | 1 | 29 | |
| GSE74704 | SAMD9 | 54809 | 9 | 0 | 11 | |
| TCGA | SAMD9 | 54809 | 56 | 4 | 36 |
Total number of gains: 140; Total number of losses: 18; Total Number of normals: 330.
Somatic mutations of SAMD9:
Generating mutation plots.
Highly correlated genes for SAMD9:
Showing top 20/1098 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SAMD9 | C3orf20 | 0.787327 | 3 | 0 | 3 |
| SAMD9 | TMEM154 | 0.779144 | 8 | 0 | 7 |
| SAMD9 | CDS1 | 0.772082 | 11 | 0 | 11 |
| SAMD9 | RBM47 | 0.768357 | 11 | 0 | 11 |
| SAMD9 | FRMD4B | 0.755178 | 10 | 0 | 10 |
| SAMD9 | RHBDL2 | 0.754357 | 7 | 0 | 7 |
| SAMD9 | ANKRD24 | 0.75197 | 3 | 0 | 3 |
| SAMD9 | C15orf48 | 0.748032 | 8 | 0 | 7 |
| SAMD9 | MREG | 0.746139 | 9 | 0 | 9 |
| SAMD9 | EVPL | 0.7407 | 11 | 0 | 10 |
| SAMD9 | PDCD6IP | 0.739334 | 10 | 0 | 9 |
| SAMD9 | IL18 | 0.737753 | 11 | 0 | 9 |
| SAMD9 | RAB11A | 0.736813 | 10 | 0 | 10 |
| SAMD9 | RAB27B | 0.736632 | 12 | 0 | 11 |
| SAMD9 | SPTLC1 | 0.736625 | 10 | 0 | 9 |
| SAMD9 | GRHL3 | 0.734358 | 7 | 0 | 7 |
| SAMD9 | GRPEL2 | 0.732003 | 6 | 0 | 5 |
| SAMD9 | ACPP | 0.731947 | 11 | 0 | 10 |
| SAMD9 | ECM1 | 0.731433 | 11 | 0 | 11 |
| SAMD9 | RANBP9 | 0.73121 | 10 | 0 | 9 |
For details and further investigation, click here
