| Full name: chromosome 6 open reading frame 47 | Alias Symbol: D6S53E|G4 | ||
| Type: protein-coding gene | Cytoband: 6p21.33 | ||
| Entrez ID: 57827 | HGNC ID: HGNC:19076 | Ensembl Gene: ENSG00000204439 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of C6orf47:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | C6orf47 | 57827 | 204968_at | 0.1154 | 0.7723 | |
| GSE20347 | C6orf47 | 57827 | 204968_at | -0.0870 | 0.4024 | |
| GSE23400 | C6orf47 | 57827 | 204968_at | -0.0158 | 0.7334 | |
| GSE26886 | C6orf47 | 57827 | 204968_at | 0.1293 | 0.5835 | |
| GSE29001 | C6orf47 | 57827 | 204968_at | -0.0219 | 0.9566 | |
| GSE38129 | C6orf47 | 57827 | 204968_at | -0.0669 | 0.4117 | |
| GSE45670 | C6orf47 | 57827 | 204968_at | 0.1024 | 0.2580 | |
| GSE53622 | C6orf47 | 57827 | 6989 | -0.1555 | 0.0067 | |
| GSE53624 | C6orf47 | 57827 | 6989 | -0.0299 | 0.5423 | |
| GSE63941 | C6orf47 | 57827 | 204968_at | -0.1786 | 0.4052 | |
| GSE77861 | C6orf47 | 57827 | 204968_at | -0.1572 | 0.3648 | |
| GSE97050 | C6orf47 | 57827 | A_23_P122532 | 0.1225 | 0.5616 | |
| SRP007169 | C6orf47 | 57827 | RNAseq | -0.6365 | 0.0432 | |
| SRP008496 | C6orf47 | 57827 | RNAseq | -0.5315 | 0.0037 | |
| SRP064894 | C6orf47 | 57827 | RNAseq | -0.0376 | 0.8268 | |
| SRP133303 | C6orf47 | 57827 | RNAseq | -0.2176 | 0.1727 | |
| SRP159526 | C6orf47 | 57827 | RNAseq | -0.3759 | 0.0456 | |
| SRP193095 | C6orf47 | 57827 | RNAseq | -0.3183 | 0.0001 | |
| SRP219564 | C6orf47 | 57827 | RNAseq | -0.2614 | 0.2154 | |
| TCGA | C6orf47 | 57827 | RNAseq | -0.0520 | 0.3317 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by C6orf47 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of C6orf47:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C6orf47 | 57827 | 5 | 1 | 24 | |
| GSE20123 | C6orf47 | 57827 | 5 | 1 | 24 | |
| GSE43470 | C6orf47 | 57827 | 5 | 1 | 37 | |
| GSE46452 | C6orf47 | 57827 | 1 | 10 | 48 | |
| GSE47630 | C6orf47 | 57827 | 7 | 4 | 29 | |
| GSE54993 | C6orf47 | 57827 | 2 | 1 | 67 | |
| GSE54994 | C6orf47 | 57827 | 11 | 4 | 38 | |
| GSE60625 | C6orf47 | 57827 | 0 | 1 | 10 | |
| GSE74703 | C6orf47 | 57827 | 5 | 0 | 31 | |
| GSE74704 | C6orf47 | 57827 | 2 | 0 | 18 | |
| TCGA | C6orf47 | 57827 | 16 | 16 | 64 |
Total number of gains: 59; Total number of losses: 39; Total Number of normals: 390.
Somatic mutations of C6orf47:
Generating mutation plots.
Highly correlated genes for C6orf47:
Showing top 20/92 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C6orf47 | CCAR1 | 0.691021 | 3 | 0 | 3 |
| C6orf47 | ZNF75A | 0.685844 | 3 | 0 | 3 |
| C6orf47 | FASN | 0.67187 | 3 | 0 | 3 |
| C6orf47 | PROSER1 | 0.670527 | 3 | 0 | 3 |
| C6orf47 | DUSP23 | 0.659939 | 3 | 0 | 3 |
| C6orf47 | ELAC2 | 0.659829 | 3 | 0 | 3 |
| C6orf47 | PPFIA3 | 0.640904 | 4 | 0 | 3 |
| C6orf47 | CCDC137 | 0.639652 | 3 | 0 | 3 |
| C6orf47 | ZC3H3 | 0.632899 | 3 | 0 | 3 |
| C6orf47 | ZBTB42 | 0.628647 | 3 | 0 | 3 |
| C6orf47 | GATA3 | 0.624022 | 4 | 0 | 3 |
| C6orf47 | TOP3B | 0.621599 | 3 | 0 | 3 |
| C6orf47 | KPNB1 | 0.614637 | 3 | 0 | 3 |
| C6orf47 | APH1A | 0.602989 | 4 | 0 | 3 |
| C6orf47 | TBC1D22B | 0.595184 | 5 | 0 | 3 |
| C6orf47 | ZNF354B | 0.587048 | 3 | 0 | 3 |
| C6orf47 | STARD3 | 0.586373 | 4 | 0 | 3 |
| C6orf47 | PCSK7 | 0.586054 | 3 | 0 | 3 |
| C6orf47 | LRP11 | 0.585822 | 3 | 0 | 3 |
| C6orf47 | TCF20 | 0.584988 | 4 | 0 | 3 |
For details and further investigation, click here
