| Full name: transcription factor 20 | Alias Symbol: AR1|SPBP | ||
| Type: protein-coding gene | Cytoband: 22q13.2 | ||
| Entrez ID: 6942 | HGNC ID: HGNC:11631 | Ensembl Gene: ENSG00000100207 | OMIM ID: 603107 |
| Drug and gene relationship at DGIdb | |||
Expression of TCF20:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TCF20 | 6942 | 212931_at | 0.1620 | 0.7208 | |
| GSE20347 | TCF20 | 6942 | 212931_at | 0.1890 | 0.1604 | |
| GSE23400 | TCF20 | 6942 | 212931_at | 0.1149 | 0.0671 | |
| GSE26886 | TCF20 | 6942 | 212931_at | 0.2395 | 0.1155 | |
| GSE29001 | TCF20 | 6942 | 212931_at | 0.1290 | 0.4686 | |
| GSE38129 | TCF20 | 6942 | 212931_at | 0.2078 | 0.2768 | |
| GSE45670 | TCF20 | 6942 | 212931_at | 0.0604 | 0.7091 | |
| GSE53622 | TCF20 | 6942 | 35941 | 0.2996 | 0.0000 | |
| GSE53624 | TCF20 | 6942 | 70610 | 0.1913 | 0.0004 | |
| GSE63941 | TCF20 | 6942 | 212931_at | 0.6581 | 0.0286 | |
| GSE77861 | TCF20 | 6942 | 212931_at | 0.2426 | 0.0183 | |
| GSE97050 | TCF20 | 6942 | A_33_P3271301 | 0.2013 | 0.4784 | |
| SRP007169 | TCF20 | 6942 | RNAseq | 1.5732 | 0.0036 | |
| SRP008496 | TCF20 | 6942 | RNAseq | 1.3957 | 0.0001 | |
| SRP064894 | TCF20 | 6942 | RNAseq | 0.1206 | 0.6379 | |
| SRP133303 | TCF20 | 6942 | RNAseq | 0.1054 | 0.5299 | |
| SRP159526 | TCF20 | 6942 | RNAseq | 0.2000 | 0.3059 | |
| SRP193095 | TCF20 | 6942 | RNAseq | 0.2537 | 0.0199 | |
| SRP219564 | TCF20 | 6942 | RNAseq | 0.3506 | 0.4794 | |
| TCGA | TCF20 | 6942 | RNAseq | 0.1876 | 0.0001 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by TCF20 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TCF20:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TCF20 | 6942 | 6 | 6 | 18 | |
| GSE20123 | TCF20 | 6942 | 6 | 5 | 19 | |
| GSE43470 | TCF20 | 6942 | 5 | 6 | 32 | |
| GSE46452 | TCF20 | 6942 | 31 | 2 | 26 | |
| GSE47630 | TCF20 | 6942 | 9 | 4 | 27 | |
| GSE54993 | TCF20 | 6942 | 3 | 6 | 61 | |
| GSE54994 | TCF20 | 6942 | 11 | 8 | 34 | |
| GSE60625 | TCF20 | 6942 | 5 | 0 | 6 | |
| GSE74703 | TCF20 | 6942 | 5 | 4 | 27 | |
| GSE74704 | TCF20 | 6942 | 3 | 3 | 14 | |
| TCGA | TCF20 | 6942 | 28 | 13 | 55 |
Total number of gains: 112; Total number of losses: 57; Total Number of normals: 319.
Somatic mutations of TCF20:
Generating mutation plots.
Highly correlated genes for TCF20:
Showing top 20/468 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TCF20 | MRPL52 | 0.719209 | 3 | 0 | 3 |
| TCF20 | ZBED4 | 0.718459 | 4 | 0 | 4 |
| TCF20 | TTF2 | 0.706791 | 3 | 0 | 3 |
| TCF20 | COCH | 0.702777 | 4 | 0 | 3 |
| TCF20 | MED30 | 0.688727 | 3 | 0 | 3 |
| TCF20 | KDM4A | 0.687447 | 3 | 0 | 3 |
| TCF20 | SUGP1 | 0.685222 | 3 | 0 | 3 |
| TCF20 | TRAPPC1 | 0.682117 | 3 | 0 | 3 |
| TCF20 | PRPS1L1 | 0.67841 | 3 | 0 | 3 |
| TCF20 | TRIB2 | 0.678278 | 4 | 0 | 4 |
| TCF20 | TRPC4 | 0.677837 | 3 | 0 | 3 |
| TCF20 | OGT | 0.676048 | 3 | 0 | 3 |
| TCF20 | PHF5A | 0.672389 | 5 | 0 | 4 |
| TCF20 | POU3F4 | 0.672276 | 3 | 0 | 3 |
| TCF20 | KRT8 | 0.66717 | 3 | 0 | 3 |
| TCF20 | TMPRSS3 | 0.659814 | 3 | 0 | 3 |
| TCF20 | BUB1 | 0.659671 | 4 | 0 | 3 |
| TCF20 | LINC01000 | 0.658773 | 3 | 0 | 3 |
| TCF20 | HMGB3 | 0.655383 | 4 | 0 | 3 |
| TCF20 | FXR1 | 0.653475 | 4 | 0 | 4 |
For details and further investigation, click here
