| Full name: CPS1 intronic transcript 1 | Alias Symbol: PRO0132|CPS1-IT | ||
| Type: non-coding RNA | Cytoband: 2q34 | ||
| Entrez ID: 29034 | HGNC ID: HGNC:30102 | Ensembl Gene: ENSG00000280837 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of CPS1-IT1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CPS1-IT1 | 29034 | 220479_at | -0.0564 | 0.8082 | |
| GSE20347 | CPS1-IT1 | 29034 | 220479_at | 0.0229 | 0.7630 | |
| GSE23400 | CPS1-IT1 | 29034 | 220479_at | -0.0889 | 0.0000 | |
| GSE26886 | CPS1-IT1 | 29034 | 220479_at | 0.0320 | 0.7460 | |
| GSE29001 | CPS1-IT1 | 29034 | 220479_at | -0.0352 | 0.7970 | |
| GSE38129 | CPS1-IT1 | 29034 | 220479_at | 0.0012 | 0.9859 | |
| GSE45670 | CPS1-IT1 | 29034 | 220479_at | 0.1040 | 0.2020 | |
| GSE63941 | CPS1-IT1 | 29034 | 220479_at | 0.0955 | 0.7567 | |
| GSE77861 | CPS1-IT1 | 29034 | 220479_at | -0.0225 | 0.8332 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of CPS1-IT1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CPS1-IT1 | 29034 | 2 | 12 | 16 | |
| GSE20123 | CPS1-IT1 | 29034 | 2 | 12 | 16 | |
| GSE43470 | CPS1-IT1 | 29034 | 1 | 6 | 36 | |
| GSE46452 | CPS1-IT1 | 29034 | 0 | 5 | 54 | |
| GSE47630 | CPS1-IT1 | 29034 | 4 | 5 | 31 | |
| GSE54993 | CPS1-IT1 | 29034 | 0 | 4 | 66 | |
| GSE54994 | CPS1-IT1 | 29034 | 9 | 9 | 35 | |
| GSE60625 | CPS1-IT1 | 29034 | 0 | 3 | 8 | |
| GSE74703 | CPS1-IT1 | 29034 | 1 | 5 | 30 | |
| GSE74704 | CPS1-IT1 | 29034 | 2 | 6 | 12 |
Total number of gains: 21; Total number of losses: 67; Total Number of normals: 304.
Somatic mutations of CPS1-IT1:
Generating mutation plots.
Highly correlated genes for CPS1-IT1:
Showing top 20/345 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CPS1-IT1 | ALPI | 0.736774 | 3 | 0 | 3 |
| CPS1-IT1 | HAAO | 0.726421 | 3 | 0 | 3 |
| CPS1-IT1 | FBP2 | 0.70993 | 4 | 0 | 3 |
| CPS1-IT1 | COLEC10 | 0.7094 | 3 | 0 | 3 |
| CPS1-IT1 | MAG | 0.70625 | 3 | 0 | 3 |
| CPS1-IT1 | UBQLN3 | 0.682568 | 3 | 0 | 3 |
| CPS1-IT1 | CEACAM3 | 0.680555 | 3 | 0 | 3 |
| CPS1-IT1 | MYO1A | 0.678543 | 3 | 0 | 3 |
| CPS1-IT1 | SLC13A3 | 0.66164 | 3 | 0 | 3 |
| CPS1-IT1 | CALCB | 0.660101 | 4 | 0 | 3 |
| CPS1-IT1 | OR2J2 | 0.65843 | 4 | 0 | 4 |
| CPS1-IT1 | NOS2 | 0.657172 | 4 | 0 | 3 |
| CPS1-IT1 | TRPV5 | 0.657016 | 3 | 0 | 3 |
| CPS1-IT1 | GFRA3 | 0.654132 | 3 | 0 | 3 |
| CPS1-IT1 | NPTXR | 0.654072 | 5 | 0 | 5 |
| CPS1-IT1 | CRHR2 | 0.650559 | 3 | 0 | 3 |
| CPS1-IT1 | MYOG | 0.648579 | 3 | 0 | 3 |
| CPS1-IT1 | GPR31 | 0.648529 | 4 | 0 | 3 |
| CPS1-IT1 | FAM163A | 0.645297 | 3 | 0 | 3 |
| CPS1-IT1 | UMOD | 0.644071 | 4 | 0 | 3 |
For details and further investigation, click here
