CALM1

 

Full name: calmodulin 1 Alias Symbol: CAMI|PHKD|DD132
Type: protein-coding gene Cytoband: 14q32.11
Entrez ID: 801 HGNC ID: HGNC:1442 Ensembl Gene: ENSG00000198668 OMIM ID: 114180
Drug and gene relationship at DGIdb

 

CALM1 involved pathways:

KEGG pathway Description View
hsa04014Ras signaling pathway
hsa04015Rap1 signaling pathway
hsa04020Calcium signaling pathway
hsa04022cGMP-PKG signaling pathway
hsa04024cAMP signaling pathway
hsa04114Oocyte meiosis
hsa04261Adrenergic signaling in cardiomyocytes
hsa04270Vascular smooth muscle contraction
hsa04713Circadian entrainment
hsa04720Long-term potentiation
hsa04722Neurotrophin signaling pathway
hsa04728Dopaminergic synapse
hsa04740Olfactory transduction
hsa04750Inflammatory mediator regulation of TRP channels
hsa04910Insulin signaling pathway
hsa04912GnRH signaling pathway
hsa04915Estrogen signaling pathway
hsa04916Melanogenesis
hsa04921Oxytocin signaling pathway
hsa04922Glucagon signaling pathway
hsa04924Renin secretion
hsa04925Aldosterone synthesis and secretion
hsa04970Salivary secretion
hsa04971Gastric acid secretion
hsa05010Alzheimer's disease
hsa05031Amphetamine addiction
hsa05034Alcoholism
hsa05152Tuberculosis
hsa05214Glioma

 

Expression of CALM1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CALM1 801 213710_s_at -0.6968 0.3762
GSE20347 CALM1 801 213710_s_at -0.2306 0.0134
GSE23400 CALM1 801 213710_s_at -0.2752 0.0000
GSE26886 CALM1 801 213710_s_at -1.2734 0.0000
GSE29001 CALM1 801 213710_s_at -0.4849 0.0005
GSE38129 CALM1 801 213710_s_at -0.3540 0.0217
GSE45670 CALM1 801 213710_s_at -0.6824 0.0002
GSE53622 CALM1 801 36210 -1.0149 0.0000
GSE53624 CALM1 801 36210 -0.8436 0.0000
GSE63941 CALM1 801 213710_s_at 1.4390 0.0029
GSE77861 CALM1 801 213710_s_at -0.1731 0.2163
GSE97050 CALM1 801 A_24_P313186 -1.6269 0.0620
SRP007169 CALM1 801 RNAseq -1.5182 0.0000
SRP008496 CALM1 801 RNAseq -1.3872 0.0000
SRP064894 CALM1 801 RNAseq -0.5375 0.0000
SRP133303 CALM1 801 RNAseq -0.2722 0.0694
SRP159526 CALM1 801 RNAseq -0.5576 0.2778
SRP193095 CALM1 801 RNAseq -0.5566 0.0005
SRP219564 CALM1 801 RNAseq -0.9828 0.0172
TCGA CALM1 801 RNAseq -0.1653 0.0002

Upregulated datasets: 1; Downregulated datasets: 4.  


 

Survival by CALM1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CALM1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CALM1 801 9 5 16
GSE20123 CALM1 801 9 5 16
GSE43470 CALM1 801 7 3 33
GSE46452 CALM1 801 16 3 40
GSE47630 CALM1 801 11 8 21
GSE54993 CALM1 801 3 8 59
GSE54994 CALM1 801 19 4 30
GSE60625 CALM1 801 0 2 9
GSE74703 CALM1 801 6 3 27
GSE74704 CALM1 801 4 4 12
TCGA CALM1 801 30 21 45

Total number of gains: 114; Total number of losses: 66; Total Number of normals: 308.  


 

Somatic mutations of CALM1:

 

Generating mutation plots.

 

Highly correlated genes for CALM1:

 

Showing top 20/876 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CALM1CLEC3B0.780273303
CALM1RASSF30.770136505
CALM1UBXN100.767773403
CALM1RBPMS20.755598505
CALM1CYP21A20.734935303
CALM1EIF4E30.7279605
CALM1XKR40.727344505
CALM1C3orf700.725926504
CALM1FGFR20.72549303
CALM1GRHL10.720327303
CALM1C1QTNF70.717125505
CALM1ZNF3830.715819303
CALM1PTCHD10.709182505
CALM1PLAC90.708044504
CALM1CEP570.700197303
CALM1CADM20.699901404
CALM1SPRYD30.698031303
CALM1AMOTL10.695506505
CALM1RAB100.694244303
CALM1LDB30.689268706

For details and further investigation, click here