| Full name: CBR3 antisense RNA 1 | Alias Symbol: PlncRNA-1 | ||
| Type: non-coding RNA | Cytoband: 21q22.12 | ||
| Entrez ID: 100506428 | HGNC ID: HGNC:43664 | Ensembl Gene: ENSG00000236830 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of CBR3-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CBR3-AS1 | 100506428 | 1559917_a_at | -0.3364 | 0.1306 | |
| GSE26886 | CBR3-AS1 | 100506428 | 1559917_a_at | -1.0226 | 0.0000 | |
| GSE45670 | CBR3-AS1 | 100506428 | 1559917_a_at | -0.1085 | 0.6661 | |
| GSE53622 | CBR3-AS1 | 100506428 | 81817 | -1.4167 | 0.0000 | |
| GSE53624 | CBR3-AS1 | 100506428 | 83067 | -1.5043 | 0.0000 | |
| GSE63941 | CBR3-AS1 | 100506428 | 1559917_a_at | 0.6795 | 0.0170 | |
| GSE77861 | CBR3-AS1 | 100506428 | 1559917_a_at | -0.3130 | 0.0428 | |
| SRP007169 | CBR3-AS1 | 100506428 | RNAseq | -2.8420 | 0.0000 | |
| SRP064894 | CBR3-AS1 | 100506428 | RNAseq | -1.6811 | 0.0000 | |
| SRP133303 | CBR3-AS1 | 100506428 | RNAseq | -1.5921 | 0.0000 | |
| SRP159526 | CBR3-AS1 | 100506428 | RNAseq | -1.5301 | 0.0014 | |
| SRP193095 | CBR3-AS1 | 100506428 | RNAseq | -1.4469 | 0.0000 | |
| SRP219564 | CBR3-AS1 | 100506428 | RNAseq | -2.1429 | 0.0031 |
Upregulated datasets: 0; Downregulated datasets: 9.
Survival by CBR3-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of CBR3-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CBR3-AS1 | 100506428 | 2 | 8 | 20 | |
| GSE20123 | CBR3-AS1 | 100506428 | 2 | 9 | 19 | |
| GSE43470 | CBR3-AS1 | 100506428 | 1 | 11 | 31 | |
| GSE46452 | CBR3-AS1 | 100506428 | 1 | 21 | 37 | |
| GSE47630 | CBR3-AS1 | 100506428 | 6 | 17 | 17 | |
| GSE54993 | CBR3-AS1 | 100506428 | 8 | 1 | 61 | |
| GSE54994 | CBR3-AS1 | 100506428 | 2 | 9 | 42 | |
| GSE60625 | CBR3-AS1 | 100506428 | 0 | 0 | 11 | |
| GSE74703 | CBR3-AS1 | 100506428 | 1 | 8 | 27 | |
| GSE74704 | CBR3-AS1 | 100506428 | 1 | 5 | 14 |
Total number of gains: 24; Total number of losses: 89; Total Number of normals: 279.
Somatic mutations of CBR3-AS1:
Generating mutation plots.
Highly correlated genes for CBR3-AS1:
Showing top 20/1103 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CBR3-AS1 | MAB21L3 | 0.753199 | 5 | 0 | 5 |
| CBR3-AS1 | TST | 0.747046 | 4 | 0 | 4 |
| CBR3-AS1 | FAM3D | 0.742116 | 6 | 0 | 6 |
| CBR3-AS1 | GFOD2 | 0.741112 | 3 | 0 | 3 |
| CBR3-AS1 | ACPP | 0.736479 | 6 | 0 | 6 |
| CBR3-AS1 | ULK3 | 0.736026 | 6 | 0 | 6 |
| CBR3-AS1 | FAM135A | 0.7352 | 5 | 0 | 5 |
| CBR3-AS1 | SLC35C1 | 0.732794 | 6 | 0 | 6 |
| CBR3-AS1 | SYTL4 | 0.731393 | 3 | 0 | 3 |
| CBR3-AS1 | PADI1 | 0.730927 | 5 | 0 | 5 |
| CBR3-AS1 | SCNN1B | 0.72959 | 6 | 0 | 6 |
| CBR3-AS1 | MAML3 | 0.728451 | 3 | 0 | 3 |
| CBR3-AS1 | GALR3 | 0.728438 | 4 | 0 | 4 |
| CBR3-AS1 | EPS8L2 | 0.726087 | 6 | 0 | 6 |
| CBR3-AS1 | CYP2C18 | 0.725761 | 5 | 0 | 5 |
| CBR3-AS1 | EVPL | 0.721966 | 7 | 0 | 7 |
| CBR3-AS1 | SH3BGRL2 | 0.721446 | 6 | 0 | 6 |
| CBR3-AS1 | KRT78 | 0.720673 | 6 | 0 | 6 |
| CBR3-AS1 | CAST | 0.720556 | 6 | 0 | 6 |
| CBR3-AS1 | ADH7 | 0.716998 | 4 | 0 | 4 |
For details and further investigation, click here
