CYP2C18

 

Full name: cytochrome P450 family 2 subfamily C member 18 Alias Symbol: P450IIC17|CPCI|CYP2C
Type: protein-coding gene Cytoband: 10q23.33
Entrez ID: 1562 HGNC ID: HGNC:2620 Ensembl Gene: ENSG00000108242 OMIM ID: 601131
Drug and gene relationship at DGIdb

 

Expression of CYP2C18:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CYP2C18 1562 208126_s_at -2.6994 0.0642
GSE20347 CYP2C18 1562 208126_s_at -2.8377 0.0000
GSE23400 CYP2C18 1562 208126_s_at -1.7316 0.0000
GSE26886 CYP2C18 1562 208126_s_at -4.2653 0.0000
GSE29001 CYP2C18 1562 208126_s_at -2.6515 0.0000
GSE38129 CYP2C18 1562 208126_s_at -2.1170 0.0000
GSE45670 CYP2C18 1562 208126_s_at -0.9159 0.0958
GSE53622 CYP2C18 1562 82034 -2.9128 0.0000
GSE53624 CYP2C18 1562 82034 -3.3528 0.0000
GSE63941 CYP2C18 1562 208126_s_at -0.0358 0.9386
GSE77861 CYP2C18 1562 208126_s_at -1.7433 0.0296
SRP007169 CYP2C18 1562 RNAseq -3.1853 0.0000
SRP008496 CYP2C18 1562 RNAseq -3.2567 0.0000
SRP064894 CYP2C18 1562 RNAseq -2.7119 0.0000
SRP133303 CYP2C18 1562 RNAseq -2.3469 0.0001
SRP159526 CYP2C18 1562 RNAseq -3.3130 0.0004
SRP193095 CYP2C18 1562 RNAseq -2.3465 0.0000
SRP219564 CYP2C18 1562 RNAseq -3.4760 0.0049
TCGA CYP2C18 1562 RNAseq -0.7869 0.0451

Upregulated datasets: 0; Downregulated datasets: 15.  


 

Survival by CYP2C18 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CYP2C18:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CYP2C18 1562 1 8 21
GSE20123 CYP2C18 1562 1 7 22
GSE43470 CYP2C18 1562 0 7 36
GSE46452 CYP2C18 1562 0 11 48
GSE47630 CYP2C18 1562 2 14 24
GSE54993 CYP2C18 1562 7 0 63
GSE54994 CYP2C18 1562 2 10 41
GSE60625 CYP2C18 1562 0 0 11
GSE74703 CYP2C18 1562 0 5 31
GSE74704 CYP2C18 1562 0 4 16
TCGA CYP2C18 1562 6 26 64

Total number of gains: 19; Total number of losses: 92; Total Number of normals: 377.  


 

Somatic mutations of CYP2C18:

 

Generating mutation plots.

 

Highly correlated genes for CYP2C18:

 

Showing top 20/1652 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CYP2C18TMPRSS11E0.8397810010
CYP2C18ABLIM10.83640911010
CYP2C18ATP13A40.833923707
CYP2C18PPL0.8313311011
CYP2C18EVPL0.83049310010
CYP2C18ENDOU0.82916210010
CYP2C18TGM30.8290411011
CYP2C18SASH10.81899210010
CYP2C18SMIM50.818531606
CYP2C18SCEL0.81833411011
CYP2C18GBP60.817413505
CYP2C18ECM10.81652210010
CYP2C18KRT780.812251606
CYP2C18C5orf66-AS10.805626606
CYP2C18RAB100.804516606
CYP2C18EPS8L20.803910010
CYP2C18BLNK0.80337910010
CYP2C18GLTP0.798472908
CYP2C18PRSS20.796626808
CYP2C18GDPD30.79650911010

For details and further investigation, click here