CBY1

 

Full name: chibby family member 1, beta catenin antagonist Alias Symbol: PIGEA14|PIGEA-14|Chibby|Cby|Chibby1
Type: protein-coding gene Cytoband: 22q13.1
Entrez ID: 25776 HGNC ID: HGNC:1307 Ensembl Gene: ENSG00000100211 OMIM ID: 607757
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of CBY1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CBY1 25776 203450_at -0.2389 0.5780
GSE20347 CBY1 25776 203450_at -0.2094 0.0818
GSE23400 CBY1 25776 203450_at -0.1627 0.0019
GSE26886 CBY1 25776 203450_at -0.2150 0.2832
GSE29001 CBY1 25776 203450_at -0.1131 0.5911
GSE38129 CBY1 25776 203450_at -0.3611 0.0104
GSE45670 CBY1 25776 203450_at -0.2039 0.1007
GSE53622 CBY1 25776 71137 -0.2849 0.0095
GSE53624 CBY1 25776 71137 -0.1964 0.0517
GSE63941 CBY1 25776 203450_at -0.2285 0.5631
GSE77861 CBY1 25776 203450_at 0.0489 0.6226
GSE97050 CBY1 25776 A_24_P74571 -0.4689 0.1415
SRP007169 CBY1 25776 RNAseq -0.2410 0.5418
SRP008496 CBY1 25776 RNAseq -0.4002 0.0982
SRP064894 CBY1 25776 RNAseq 0.2444 0.3451
SRP133303 CBY1 25776 RNAseq -0.1230 0.3437
SRP159526 CBY1 25776 RNAseq 0.1823 0.4264
SRP193095 CBY1 25776 RNAseq -0.1280 0.2795
SRP219564 CBY1 25776 RNAseq -0.4118 0.4049
TCGA CBY1 25776 RNAseq -0.0806 0.1720

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by CBY1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CBY1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CBY1 25776 6 5 19
GSE20123 CBY1 25776 6 4 20
GSE43470 CBY1 25776 5 5 33
GSE46452 CBY1 25776 32 2 25
GSE47630 CBY1 25776 9 4 27
GSE54993 CBY1 25776 3 6 61
GSE54994 CBY1 25776 9 7 37
GSE60625 CBY1 25776 5 0 6
GSE74703 CBY1 25776 5 4 27
GSE74704 CBY1 25776 3 2 15
TCGA CBY1 25776 28 15 53

Total number of gains: 111; Total number of losses: 54; Total Number of normals: 323.  


 

Somatic mutations of CBY1:

 

Generating mutation plots.

 

Highly correlated genes for CBY1:

 

Showing top 20/580 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CBY1NFASC0.744285404
CBY1CELF60.715257303
CBY1PDE4DIP0.709148303
CBY1GHITM0.707275303
CBY1THAP20.692485303
CBY1PDS5B0.691412303
CBY1USP9X0.686483403
CBY1PNKD0.686249505
CBY1TTC330.684515404
CBY1ATXN20.683904303
CBY1RYR30.682354303
CBY1COX6A10.676173303
CBY1ST6GAL20.675758303
CBY1DAAM20.675736504
CBY1CNN10.675417504
CBY1UBE4B0.673059503
CBY1SRF0.669084403
CBY1ELOF10.668581303
CBY1ZNF6640.668291403
CBY1AP3S20.668241303

For details and further investigation, click here