CCDC15

 

Full name: coiled-coil domain containing 15 Alias Symbol: FLJ13215
Type: protein-coding gene Cytoband: 11q24.2
Entrez ID: 80071 HGNC ID: HGNC:25798 Ensembl Gene: ENSG00000149548 OMIM ID: 
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of CCDC15:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CCDC15 80071 220466_at 0.5634 0.1852
GSE20347 CCDC15 80071 220466_at 0.1578 0.2455
GSE23400 CCDC15 80071 220466_at -0.0174 0.6856
GSE26886 CCDC15 80071 220466_at 0.2318 0.1177
GSE29001 CCDC15 80071 220466_at 0.2006 0.5015
GSE38129 CCDC15 80071 220466_at 0.2048 0.0633
GSE45670 CCDC15 80071 220466_at 0.5336 0.0007
GSE53622 CCDC15 80071 44015 0.3190 0.0095
GSE53624 CCDC15 80071 44015 0.2734 0.0191
GSE63941 CCDC15 80071 220466_at 0.4514 0.2934
GSE77861 CCDC15 80071 220466_at 0.0980 0.5195
GSE97050 CCDC15 80071 A_23_P44942 0.0399 0.8627
SRP064894 CCDC15 80071 RNAseq 0.0656 0.8071
SRP133303 CCDC15 80071 RNAseq 0.2583 0.0360
SRP159526 CCDC15 80071 RNAseq 0.2296 0.5628
SRP193095 CCDC15 80071 RNAseq -0.1459 0.3318
SRP219564 CCDC15 80071 RNAseq 0.1529 0.7030
TCGA CCDC15 80071 RNAseq 0.3252 0.0020

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by CCDC15 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CCDC15:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CCDC15 80071 0 13 17
GSE20123 CCDC15 80071 0 13 17
GSE43470 CCDC15 80071 2 7 34
GSE46452 CCDC15 80071 3 26 30
GSE47630 CCDC15 80071 2 19 19
GSE54993 CCDC15 80071 10 0 60
GSE54994 CCDC15 80071 5 19 29
GSE60625 CCDC15 80071 0 3 8
GSE74703 CCDC15 80071 1 5 30
GSE74704 CCDC15 80071 0 9 11
TCGA CCDC15 80071 6 50 40

Total number of gains: 29; Total number of losses: 164; Total Number of normals: 295.  


 

Somatic mutations of CCDC15:

 

Generating mutation plots.

 

Highly correlated genes for CCDC15:

 

Showing top 20/457 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CCDC15TAF110.825664303
CCDC15CNOT20.8059303
CCDC15EIF2B50.784164303
CCDC15SLC25A440.783646303
CCDC15LSG10.782221303
CCDC15NFXL10.77877303
CCDC15DGKH0.777544303
CCDC15BCCIP0.774974303
CCDC15HAT10.768788303
CCDC15SMC30.757728303
CCDC15ROMO10.754661303
CCDC15GPR1580.754246303
CCDC15GRWD10.750439404
CCDC15GCDH0.749818303
CCDC15ZNF518B0.748261303
CCDC15COMMD70.746516303
CCDC15TRIM50.739272303
CCDC15SMARCAD10.738735303
CCDC15METTL30.738677303
CCDC15MZT10.736976303

For details and further investigation, click here