| Full name: CHRM3 antisense RNA 2 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 1q43 | ||
| Entrez ID: 100506915 | HGNC ID: HGNC:43725 | Ensembl Gene: ENSG00000233355 | OMIM ID: |
Expression of CHRM3-AS2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CHRM3-AS2 | 100506915 | 1557733_a_at | 0.1662 | 0.6659 | |
| GSE26886 | CHRM3-AS2 | 100506915 | 1557733_a_at | -0.1569 | 0.1133 | |
| GSE45670 | CHRM3-AS2 | 100506915 | 1557733_a_at | 0.0634 | 0.6550 | |
| GSE63941 | CHRM3-AS2 | 100506915 | 1557733_a_at | 0.3102 | 0.0068 | |
| GSE77861 | CHRM3-AS2 | 100506915 | 1557733_a_at | -0.1734 | 0.1784 | |
| SRP133303 | CHRM3-AS2 | 100506915 | RNAseq | 0.8100 | 0.0487 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of CHRM3-AS2:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CHRM3-AS2 | 100506915 | 8 | 2 | 20 | |
| GSE20123 | CHRM3-AS2 | 100506915 | 8 | 2 | 20 | |
| GSE43470 | CHRM3-AS2 | 100506915 | 7 | 1 | 35 | |
| GSE46452 | CHRM3-AS2 | 100506915 | 4 | 2 | 53 | |
| GSE47630 | CHRM3-AS2 | 100506915 | 15 | 0 | 25 | |
| GSE54993 | CHRM3-AS2 | 100506915 | 0 | 6 | 64 | |
| GSE54994 | CHRM3-AS2 | 100506915 | 16 | 0 | 37 | |
| GSE60625 | CHRM3-AS2 | 100506915 | 0 | 0 | 11 | |
| GSE74703 | CHRM3-AS2 | 100506915 | 7 | 1 | 28 | |
| GSE74704 | CHRM3-AS2 | 100506915 | 2 | 1 | 17 |
Total number of gains: 67; Total number of losses: 15; Total Number of normals: 310.
Somatic mutations of CHRM3-AS2:
Generating mutation plots.
Highly correlated genes for CHRM3-AS2:
Showing top 20/41 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CHRM3-AS2 | CD96 | 0.693592 | 3 | 0 | 3 |
| CHRM3-AS2 | IL2RB | 0.676562 | 3 | 0 | 3 |
| CHRM3-AS2 | CD2 | 0.651939 | 4 | 0 | 4 |
| CHRM3-AS2 | BTLA | 0.6467 | 3 | 0 | 3 |
| CHRM3-AS2 | ST14 | 0.64287 | 3 | 0 | 3 |
| CHRM3-AS2 | CD3G | 0.635453 | 4 | 0 | 3 |
| CHRM3-AS2 | TRAT1 | 0.632226 | 3 | 0 | 3 |
| CHRM3-AS2 | SPOCK2 | 0.624469 | 3 | 0 | 3 |
| CHRM3-AS2 | NLRC3 | 0.623632 | 4 | 0 | 3 |
| CHRM3-AS2 | SASH3 | 0.622789 | 4 | 0 | 4 |
| CHRM3-AS2 | CD48 | 0.621934 | 4 | 0 | 4 |
| CHRM3-AS2 | SIRPG | 0.61879 | 4 | 0 | 3 |
| CHRM3-AS2 | RENBP | 0.61301 | 3 | 0 | 3 |
| CHRM3-AS2 | CD27 | 0.609095 | 3 | 0 | 3 |
| CHRM3-AS2 | CD3D | 0.604171 | 5 | 0 | 4 |
| CHRM3-AS2 | MAP4K1 | 0.597935 | 3 | 0 | 3 |
| CHRM3-AS2 | CD6 | 0.597719 | 4 | 0 | 3 |
| CHRM3-AS2 | CD247 | 0.596552 | 3 | 0 | 3 |
| CHRM3-AS2 | TBC1D10C | 0.59384 | 4 | 0 | 4 |
| CHRM3-AS2 | PARVG | 0.593711 | 3 | 0 | 3 |
For details and further investigation, click here
