CLDN15

 

Full name: claudin 15 Alias Symbol: 
Type: protein-coding gene Cytoband: 7q22.1
Entrez ID: 24146 HGNC ID: HGNC:2036 Ensembl Gene: ENSG00000106404 OMIM ID: 615778
Drug and gene relationship at DGIdb

 

CLDN15 involved pathways:

KEGG pathway Description View
hsa04530Tight junction

 

Expression of CLDN15:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CLDN15 24146 219640_at 0.0534 0.9172
GSE20347 CLDN15 24146 219640_at 0.1512 0.0919
GSE23400 CLDN15 24146 219640_at 0.0917 0.0173
GSE26886 CLDN15 24146 219640_at 0.3648 0.0017
GSE29001 CLDN15 24146 219640_at -0.0339 0.8080
GSE38129 CLDN15 24146 219640_at 0.0811 0.3452
GSE45670 CLDN15 24146 219640_at 0.1886 0.1239
GSE53622 CLDN15 24146 5755 0.2810 0.0001
GSE53624 CLDN15 24146 5755 0.1821 0.0589
GSE63941 CLDN15 24146 219640_at 0.4787 0.1864
GSE77861 CLDN15 24146 219640_at 0.0934 0.4485
GSE97050 CLDN15 24146 A_23_P500886 0.3378 0.3101
SRP007169 CLDN15 24146 RNAseq 0.8780 0.2343
SRP064894 CLDN15 24146 RNAseq 0.7721 0.0046
SRP133303 CLDN15 24146 RNAseq 0.2715 0.1103
SRP159526 CLDN15 24146 RNAseq 0.0508 0.8761
SRP193095 CLDN15 24146 RNAseq 0.4061 0.1130
SRP219564 CLDN15 24146 RNAseq 1.0165 0.0454
TCGA CLDN15 24146 RNAseq -0.0433 0.6738

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by CLDN15 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CLDN15:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CLDN15 24146 13 0 17
GSE20123 CLDN15 24146 13 0 17
GSE43470 CLDN15 24146 7 2 34
GSE46452 CLDN15 24146 11 1 47
GSE47630 CLDN15 24146 7 3 30
GSE54993 CLDN15 24146 1 10 59
GSE54994 CLDN15 24146 15 3 35
GSE60625 CLDN15 24146 0 0 11
GSE74703 CLDN15 24146 7 1 28
GSE74704 CLDN15 24146 9 0 11
TCGA CLDN15 24146 53 6 37

Total number of gains: 136; Total number of losses: 26; Total Number of normals: 326.  


 

Somatic mutations of CLDN15:

 

Generating mutation plots.

 

Highly correlated genes for CLDN15:

 

Showing top 20/263 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CLDN15FBL0.700379303
CLDN15YDJC0.688563403
CLDN15SLC43A20.659291303
CLDN15SNAPC40.65542707
CLDN15CLDN60.654954303
CLDN15CNTROB0.653569303
CLDN15SLC9A10.643995303
CLDN15TOP1MT0.631712303
CLDN15CDCA40.62976303
CLDN15BCAR10.629674303
CLDN15ORAI10.629673303
CLDN15TBCB0.628037404
CLDN15PANX20.62532504
CLDN15ARHGEF190.624532404
CLDN15NOB10.621023403
CLDN15CABIN10.61957504
CLDN15WDR540.6179303
CLDN15TSPYL20.617607504
CLDN15TCL1A0.616068403
CLDN15HES40.615851303

For details and further investigation, click here