| Full name: C-type lectin domain containing 16A | Alias Symbol: Gop-1 | ||
| Type: protein-coding gene | Cytoband: 16p13.13 | ||
| Entrez ID: 23274 | HGNC ID: HGNC:29013 | Ensembl Gene: ENSG00000038532 | OMIM ID: 611303 |
| Drug and gene relationship at DGIdb | |||
Expression of CLEC16A:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CLEC16A | 23274 | 212786_at | 0.0335 | 0.9700 | |
| GSE20347 | CLEC16A | 23274 | 212786_at | -0.3130 | 0.0033 | |
| GSE23400 | CLEC16A | 23274 | 212786_at | -0.0023 | 0.9709 | |
| GSE26886 | CLEC16A | 23274 | 212786_at | 0.1286 | 0.4999 | |
| GSE29001 | CLEC16A | 23274 | 212786_at | -0.0342 | 0.8638 | |
| GSE38129 | CLEC16A | 23274 | 212786_at | -0.1448 | 0.1278 | |
| GSE45670 | CLEC16A | 23274 | 212786_at | 0.2176 | 0.1614 | |
| GSE53622 | CLEC16A | 23274 | 112291 | -0.2657 | 0.0019 | |
| GSE53624 | CLEC16A | 23274 | 112291 | -0.2820 | 0.0000 | |
| GSE63941 | CLEC16A | 23274 | 212786_at | 0.2940 | 0.3725 | |
| GSE77861 | CLEC16A | 23274 | 212786_at | -0.0795 | 0.6729 | |
| GSE97050 | CLEC16A | 23274 | A_33_P3422888 | -0.0358 | 0.8779 | |
| SRP007169 | CLEC16A | 23274 | RNAseq | -0.6812 | 0.0847 | |
| SRP008496 | CLEC16A | 23274 | RNAseq | -0.8176 | 0.0004 | |
| SRP064894 | CLEC16A | 23274 | RNAseq | -0.2467 | 0.1321 | |
| SRP133303 | CLEC16A | 23274 | RNAseq | 0.1455 | 0.4362 | |
| SRP159526 | CLEC16A | 23274 | RNAseq | -0.3906 | 0.0946 | |
| SRP193095 | CLEC16A | 23274 | RNAseq | -0.1267 | 0.2680 | |
| SRP219564 | CLEC16A | 23274 | RNAseq | -0.3039 | 0.2667 | |
| TCGA | CLEC16A | 23274 | RNAseq | -0.0950 | 0.0479 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by CLEC16A expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CLEC16A:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CLEC16A | 23274 | 5 | 4 | 21 | |
| GSE20123 | CLEC16A | 23274 | 5 | 3 | 22 | |
| GSE43470 | CLEC16A | 23274 | 3 | 3 | 37 | |
| GSE46452 | CLEC16A | 23274 | 38 | 1 | 20 | |
| GSE47630 | CLEC16A | 23274 | 14 | 6 | 20 | |
| GSE54993 | CLEC16A | 23274 | 3 | 5 | 62 | |
| GSE54994 | CLEC16A | 23274 | 5 | 9 | 39 | |
| GSE60625 | CLEC16A | 23274 | 4 | 0 | 7 | |
| GSE74703 | CLEC16A | 23274 | 3 | 2 | 31 | |
| GSE74704 | CLEC16A | 23274 | 2 | 1 | 17 | |
| TCGA | CLEC16A | 23274 | 20 | 13 | 63 |
Total number of gains: 102; Total number of losses: 47; Total Number of normals: 339.
Somatic mutations of CLEC16A:
Generating mutation plots.
Highly correlated genes for CLEC16A:
Showing top 20/392 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CLEC16A | LPCAT3 | 0.815541 | 3 | 0 | 3 |
| CLEC16A | TET2 | 0.795402 | 3 | 0 | 3 |
| CLEC16A | DCAF12 | 0.776192 | 3 | 0 | 3 |
| CLEC16A | MRPS7 | 0.767029 | 3 | 0 | 3 |
| CLEC16A | PHLPP1 | 0.742529 | 3 | 0 | 3 |
| CLEC16A | CNOT4 | 0.731184 | 3 | 0 | 3 |
| CLEC16A | TFIP11 | 0.729584 | 3 | 0 | 3 |
| CLEC16A | SLC38A5 | 0.718214 | 3 | 0 | 3 |
| CLEC16A | QPCTL | 0.718002 | 3 | 0 | 3 |
| CLEC16A | TTC17 | 0.7145 | 3 | 0 | 3 |
| CLEC16A | GTF3C2 | 0.713536 | 3 | 0 | 3 |
| CLEC16A | PPP1CA | 0.700152 | 3 | 0 | 3 |
| CLEC16A | TPRA1 | 0.690939 | 3 | 0 | 3 |
| CLEC16A | MTA2 | 0.688675 | 4 | 0 | 4 |
| CLEC16A | NDST2 | 0.686203 | 3 | 0 | 3 |
| CLEC16A | PUSL1 | 0.685467 | 3 | 0 | 3 |
| CLEC16A | ZDHHC5 | 0.684001 | 4 | 0 | 3 |
| CLEC16A | HERC1 | 0.683814 | 4 | 0 | 3 |
| CLEC16A | DMBT1 | 0.68188 | 3 | 0 | 3 |
| CLEC16A | SF3B3 | 0.680899 | 4 | 0 | 3 |
For details and further investigation, click here
