| Full name: contactin 6 | Alias Symbol: NB-3 | ||
| Type: protein-coding gene | Cytoband: 3p26.3 | ||
| Entrez ID: 27255 | HGNC ID: HGNC:2176 | Ensembl Gene: ENSG00000134115 | OMIM ID: 607220 |
| Drug and gene relationship at DGIdb | |||
Expression of CNTN6:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CNTN6 | 27255 | 207195_at | 0.0832 | 0.7359 | |
| GSE20347 | CNTN6 | 27255 | 207195_at | -0.0860 | 0.1241 | |
| GSE23400 | CNTN6 | 27255 | 207195_at | -0.0614 | 0.0002 | |
| GSE26886 | CNTN6 | 27255 | 207195_at | 0.0639 | 0.4485 | |
| GSE29001 | CNTN6 | 27255 | 207195_at | -0.0696 | 0.5259 | |
| GSE38129 | CNTN6 | 27255 | 207195_at | -0.1000 | 0.0991 | |
| GSE45670 | CNTN6 | 27255 | 207195_at | 0.0513 | 0.7339 | |
| GSE53622 | CNTN6 | 27255 | 135438 | 0.3955 | 0.0000 | |
| GSE53624 | CNTN6 | 27255 | 135438 | 0.3695 | 0.0049 | |
| GSE63941 | CNTN6 | 27255 | 207195_at | 0.0387 | 0.8040 | |
| GSE77861 | CNTN6 | 27255 | 207195_at | -0.0940 | 0.1795 | |
| GSE97050 | CNTN6 | 27255 | A_33_P3329378 | -0.0716 | 0.7829 | |
| TCGA | CNTN6 | 27255 | RNAseq | -1.1253 | 0.4789 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by CNTN6 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CNTN6:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CNTN6 | 27255 | 2 | 18 | 10 | |
| GSE20123 | CNTN6 | 27255 | 2 | 18 | 10 | |
| GSE43470 | CNTN6 | 27255 | 0 | 21 | 22 | |
| GSE46452 | CNTN6 | 27255 | 2 | 18 | 39 | |
| GSE47630 | CNTN6 | 27255 | 1 | 24 | 15 | |
| GSE54993 | CNTN6 | 27255 | 6 | 1 | 63 | |
| GSE54994 | CNTN6 | 27255 | 2 | 31 | 20 | |
| GSE60625 | CNTN6 | 27255 | 2 | 3 | 6 | |
| GSE74703 | CNTN6 | 27255 | 0 | 18 | 18 | |
| GSE74704 | CNTN6 | 27255 | 1 | 12 | 7 | |
| TCGA | CNTN6 | 27255 | 4 | 65 | 27 |
Total number of gains: 22; Total number of losses: 229; Total Number of normals: 237.
Somatic mutations of CNTN6:
Generating mutation plots.
Highly correlated genes for CNTN6:
Showing top 20/426 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CNTN6 | GPR149 | 0.760411 | 3 | 0 | 3 |
| CNTN6 | INF2 | 0.721564 | 3 | 0 | 3 |
| CNTN6 | C20orf173 | 0.677483 | 3 | 0 | 3 |
| CNTN6 | GYPE | 0.668468 | 4 | 0 | 4 |
| CNTN6 | CBX4 | 0.658527 | 4 | 0 | 4 |
| CNTN6 | DUSP21 | 0.658483 | 3 | 0 | 3 |
| CNTN6 | MAMSTR | 0.655414 | 3 | 0 | 3 |
| CNTN6 | PRR18 | 0.652462 | 3 | 0 | 3 |
| CNTN6 | C8G | 0.643857 | 5 | 0 | 4 |
| CNTN6 | PAX3 | 0.632143 | 6 | 0 | 6 |
| CNTN6 | KIF6 | 0.621255 | 3 | 0 | 3 |
| CNTN6 | FTHL17 | 0.621102 | 3 | 0 | 3 |
| CNTN6 | NAT2 | 0.620619 | 3 | 0 | 3 |
| CNTN6 | TTTY11 | 0.620098 | 4 | 0 | 3 |
| CNTN6 | DNAI1 | 0.620008 | 7 | 0 | 6 |
| CNTN6 | ELSPBP1 | 0.618157 | 5 | 0 | 4 |
| CNTN6 | CPN1 | 0.618027 | 10 | 0 | 8 |
| CNTN6 | CYP2D6 | 0.615043 | 6 | 0 | 4 |
| CNTN6 | RAB3IL1 | 0.614477 | 4 | 0 | 4 |
| CNTN6 | GGTLC1 | 0.612849 | 4 | 0 | 3 |
For details and further investigation, click here
